Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

4-Amino-1,2-oxazolidin-3-one

Simulation outputs:

InChI=1S/C3H6N2O2/c4-2-1-7-5-3(2)6/h2H,1,4H2,(H,5,6)/t2-/m1/s1 Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.02815
Temperature 298 K
pH 7.4
InChI InChI=1S/C3H6N2O2/c4-2-1-7-5-3(2)6/h2H,1,4H2,(H,5,6)/t2-/m1/s1
Note 1 mixture

Sample description:

Compound Type Concentration
4-amino-1,2-oxazolidin-3-one solute 100mM
D2O solvent 100.0%
DSS reference 0.01mg/mL
sodium phosphate buffer 50mM
sodium azide cytocide 500uM
Show/Hide Spin System Matrix

Spin System Matrix

8 9 10 8a 9a 10a
8 4.495 -9.878 7.792 0 0 0
9 0 4.138 7.052 0 0 0
10 0 0 4.231 0 0 0
8a 0 0 0 4.091 -10.989 3.719
9a 0 0 0 0 3.943 3.581
10a 0 0 0 0 0 4.342

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.438509 standard
0.440864 standard
0.584022 standard
0.587737 standard
0.572589 standard
0.604607 standard
0.429014 standard
0.455765 standard
0.421924 standard
0.557154 standard
0.462321 standard
0.623767 standard
0.572293 standard
0.773733 standard
0.477121 standard
0.541021 standard
1.00134 standard
0.511698 standard
0.560402 standard
0.533827 standard
0.537421 standard
0.449221 standard
0.0171861 standard
0.0200411 standard
0.040057 standard
0.365396 standard
0.427605 standard
0.464105 standard
0.909321 standard
0.608693 standard
0.547061 standard
0.505456 standard
1.00001 standard
0.157255 standard
0.200905 standard
0.028358 standard
0.0565431 standard
0.0780849 standard
0.431402 standard
0.92013 standard
0.65921 standard
0.409074 standard
0.342412 standard
0.662299 standard
0.511786 standard
0.597295 standard
1.0 standard
0.222924 standard
0.141711 standard
0.327256 standard
0.10876 standard
0.0451653 standard
0.127522 standard
0.161428 standard
0.649175 standard
0.923795 standard
0.909117 standard
0.861191 standard
0.490714 standard
0.7971 standard
1.00003 standard
0.675907 standard
0.181053 standard
0.743983 standard
0.749796 standard
0.939322 standard
0.729169 standard
0.378151 standard
0.306781 standard
0.389458 standard
0.446691 standard
0.183352 standard
0.0705645 standard
0.126863 standard
0.156261 standard
0.556639 standard
0.71624 standard
0.649648 standard
0.715172 standard
0.423173 standard
0.714144 standard
1.00003 standard
0.570073 standard
0.922862 standard
0.757369 standard
0.46566 standard
0.359141 standard
0.301753 standard
0.342211 standard
0.384985 standard
0.169835 standard
0.0580794 standard
0.160073 standard
0.192943 standard
0.619997 standard
0.762019 standard
0.665467 standard
0.363373 standard
0.779831 standard
0.488998 standard
0.19885 standard
0.934248 standard
1.0 standard
0.630383 standard
0.772307 standard
0.841848 standard
0.550692 standard
0.376749 standard
0.393182 standard
0.433811 standard
0.206541 standard
0.0600905 standard
0.318077 standard
0.348469 standard
0.655552 standard
0.713344 standard
0.648023 standard
0.737895 standard
0.362392 standard
0.342512 standard
0.679615 standard
0.583196 standard
0.847172 standard
0.76659 standard
0.796547 standard
0.483831 standard
0.583285 standard
1.00001 standard
0.468048 standard
0.0571667 standard
0.605032 standard
0.513812 standard
0.526911 standard
0.370225 standard
0.0141295 standard
0.376772 standard
0.401192 standard
0.614137 standard
0.648663 standard
0.606004 standard
0.660301 standard
0.481042 standard
0.493955 standard
0.43813 standard
0.573121 standard
0.400089 standard
0.718547 standard
0.642767 standard
0.816825 standard
0.471639 standard
0.56252 standard
1.0 standard
0.485757 standard
0.0131755 standard
0.589113 standard
0.525162 standard
0.532061 standard
0.413775 standard
0.410919 standard
0.422864 standard
0.594905 standard
0.619104 standard
0.58759 standard
0.628235 standard
0.411923 standard
0.466034 standard
0.433965 standard
0.56434 standard
0.442297 standard
0.660642 standard
0.598348 standard
0.78635 standard
0.475716 standard
0.556769 standard
1.00089 standard
0.4976 standard
0.574512 standard
0.532803 standard
0.53753 standard
0.437349 standard
0.437375 standard
0.439732 standard
0.585092 standard
0.586221 standard
0.571013 standard
0.602973 standard
0.427899 standard
0.454572 standard
0.420828 standard
0.555663 standard
0.46111 standard
0.622076 standard
0.570752 standard
0.771623 standard
0.475863 standard
0.539643 standard
1.00132 standard
0.5104 standard
0.558904 standard
0.532385 standard
0.535968 standard
0.44805 standard
0.445334 standard
0.447693 standard
0.570356 standard
0.568681 standard
0.556285 standard
0.582922 standard
0.436876 standard
0.457595 standard
0.426427 standard
0.546057 standard
0.469057 standard
0.594189 standard
0.551187 standard
0.762246 standard
0.473833 standard
0.532435 standard
1.00001 standard
0.508283 standard
0.544553 standard
0.528853 standard
0.531725 standard
0.452354 standard
0.456043 standard
0.458367 standard
0.564167 standard
0.562381 standard
0.551608 standard
0.574744 standard
0.448392 standard
0.465758 standard
0.43649 standard
0.545759 standard
0.48016 standard
0.58124 standard
0.543887 standard
0.750627 standard
0.477991 standard
0.532162 standard
1.00001 standard
0.512289 standard
0.540037 standard
0.531857 standard
0.534264 standard
0.46027 standard
0.45976 standard
0.462718 standard
0.56276 standard
0.560803 standard
0.559928 standard
0.561909 standard
0.463017 standard
0.470216 standard
0.441483 standard
0.544623 standard
0.48321 standard
0.577061 standard
0.541984 standard
0.76176 standard
0.480369 standard
0.533568 standard
1.0 standard
0.52359 standard
0.538919 standard
0.533779 standard
0.53604 standard
0.464202 standard
0.464488 standard
0.467334 standard
0.560432 standard
0.557972 standard
0.558072 standard
0.560083 standard
0.467297 standard
0.465159 standard
0.445687 standard
0.545366 standard
0.487887 standard
0.573151 standard
0.540185 standard
0.746405 standard
0.482437 standard
0.524739 standard
1.0 standard
0.524728 standard
0.537776 standard
0.53597 standard
0.538109 standard
0.467562 standard
0.466646 standard
0.469367 standard
0.552194 standard
0.549846 standard
0.549704 standard
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0.468647 standard
0.466394 standard
0.44831 standard
0.539967 standard
0.489442 standard
0.560909 standard
0.531764 standard
0.741189 standard
0.480969 standard
0.521729 standard
1.00522 standard
0.520548 standard
0.530272 standard
0.533184 standard
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0.468082 standard
0.469149 standard
0.471811 standard
0.550378 standard
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0.547855 standard
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0.469314 standard
0.451066 standard
0.540035 standard
0.492258 standard
0.55784 standard
0.53015 standard
0.72716 standard
0.482066 standard
0.522054 standard
1.00579 standard
0.522048 standard
0.529064 standard
0.533129 standard
0.534845 standard
0.469957 standard
0.471801 standard
0.474511 standard
0.549263 standard
0.546897 standard
0.546593 standard
0.548694 standard
0.473611 standard
0.471225 standard
0.453805 standard
0.539271 standard
0.493834 standard
0.555365 standard
0.52903 standard
0.71434 standard
0.483362 standard
0.522794 standard
1.00636 standard
0.522789 standard
0.528056 standard
0.533523 standard
0.535218 standard
0.472005 standard
0.47731 standard
0.479876 standard
0.547374 standard
0.545056 standard
0.54463 standard
0.546744 standard
0.478728 standard
0.476385 standard
0.459191 standard
0.538855 standard
0.497445 standard
0.551819 standard
0.527797 standard
0.766438 standard
0.486213 standard
0.523971 standard
1.00756 standard
0.523967 standard
0.527236 standard
0.535844 standard
0.537313 standard
0.475857 standard
0.484909 standard
0.487437 standard
0.546541 standard
0.544334 standard
0.542703 standard
0.544952 standard
0.48698 standard
0.484502 standard
0.46821 standard
0.541819 standard
0.506785 standard
0.547113 standard
0.526839 standard
0.777209 standard
0.491521 standard
0.527126 standard
1.01013 standard
0.527124 standard
0.526501 standard
0.539981 standard
0.541301 standard
0.482921 standard
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