Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

5-Aminovaleric acid

Simulation outputs:

InChI=1S/C5H11NO2/c6-4-2-1-3-5(7)8/h1-4,6H2,(H,7,8) Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.01972
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H11NO2/c6-4-2-1-3-5(7)8/h1-4,6H2,(H,7,8)
Note 1 Processed by Tevin Li

Sample description:

Compound Type Concentration
5-Aminovaleric acid Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 0.1%
Show/Hide Spin System Matrix

Spin System Matrix

9 10 11 12 13 14 15 16
9 1.672 -15.419 5.254 11.161 8.255 5.551 0 0
10 0 1.629 5.825 5.253 5.784 8.255 0 0
11 0 0 1.643 -20.468 0 0 9.249 4.287
12 0 0 0 1.617 0 0 7.185 9.249
13 0 0 0 0 2.22 -12.896 0 0
14 0 0 0 0 0 2.222 0 0
15 0 0 0 0 0 0 2.993 -31.729
16 0 0 0 0 0 0 0 3.001

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.00524949 standard
0.0020071 standard
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1.00027 standard
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1.0 standard
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