Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download entry NMR-STAR

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External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-Arginine

Simulation outputs:

InChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/t4-/m0/s1 Parameter Value
Field strength 600.13(MHz)
RMSD of the fit 0.01332
Temperature 298 K
pH 7.4
InChI InChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/t4-/m0/s1
Note 1 Processed by Kirsten Gasser

Sample description:

Compound Type Concentration
L-Arginine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

13 14 15 16 17 18 19
13 1.922 -13.827 6.08 3.556 6.042 6.042 0
14 0 1.896 11.242 6.08 6.042 6.042 0
15 0 0 1.726 -13.508 0 0 6.824
16 0 0 0 1.642 0 0 6.824
17 0 0 0 0 3.763 -12.4 0
18 0 0 0 0 0 3.763 0
19 0 0 0 0 0 0 3.234

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.0488046 standard
0.0682463 standard
0.082817 standard
0.0940594 standard
0.123065 standard
0.137818 standard
0.147373 standard
0.146268 standard
0.109656 standard
0.0909348 standard
0.0744296 standard
0.152519 standard
0.100552 standard
0.129754 standard
0.182528 standard
0.102628 standard
0.148334 standard
0.0623729 standard
0.111236 standard
0.0606647 standard
0.0192969 standard
0.0487081 standard
0.0607801 standard
0.075611 standard
0.0492563 standard
0.184326 standard
0.143558 standard
0.220695 standard
0.309116 standard
0.208716 standard
0.326031 standard
0.177408 standard
0.155701 standard
0.0827698 standard
0.0426921 standard
0.027594 standard
0.017407 standard
0.010227 standard
0.254346 standard
0.497661 standard
0.254518 standard
0.513793 standard
1.00019 standard
0.513839 standard
0.0363751 standard
0.0800231 standard
0.296369 standard
0.498077 standard
1.0 standard
0.879332 standard
0.20737 standard
0.0808481 standard
0.0695493 standard
0.0345551 standard
0.00693512 standard
0.00856712 standard
0.0146791 standard
0.180402 standard
0.315155 standard
0.102629 standard
0.143006 standard
0.369931 standard
0.60575 standard
0.253774 standard
0.0143991 standard
0.0936021 standard
0.154884 standard
0.445616 standard
0.410444 standard
0.881134 standard
0.985115 standard
1.0 standard
0.780312 standard
0.59423 standard
0.616822 standard
0.385772 standard
0.291045 standard
0.146725 standard
0.108206 standard
0.0646504 standard
0.0194381 standard
0.275133 standard
0.526619 standard
0.265001 standard
0.0220471 standard
0.664592 standard
0.991545 standard
0.474363 standard
0.019192 standard
0.11728 standard
0.154216 standard
0.411406 standard
0.368367 standard
0.696855 standard
0.735905 standard
0.530475 standard
0.581678 standard
0.476454 standard
0.57142 standard
0.236244 standard
0.324182 standard
0.0990847 standard
0.069421 standard
0.251719 standard
0.523571 standard
0.281558 standard
0.66751 standard
1.0 standard
0.465012 standard
0.020153 standard
0.123732 standard
0.14814 standard
0.381599 standard
0.346881 standard
0.598448 standard
0.346069 standard
0.464929 standard
0.545593 standard
0.486426 standard
0.576343 standard
0.331417 standard
0.0942802 standard
0.071019 standard
0.243237 standard
0.524624 standard
0.278353 standard
0.652869 standard
1.0 standard
0.457618 standard
0.00822612 standard
0.0222542 standard
0.0231361 standard
0.127281 standard
0.144849 standard
0.280853 standard
0.358714 standard
0.330341 standard
0.511955 standard
0.307632 standard
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0.567156 standard
0.337866 standard
0.0906603 standard
0.0721501 standard
0.237869 standard
0.513089 standard
0.278584 standard
0.63292 standard
1.0 standard
0.444409 standard
0.0196282 standard
0.0557481 standard
0.133431 standard
0.31378 standard
0.388408 standard
0.148992 standard
0.265687 standard
0.169338 standard
0.0899503 standard
0.0663731 standard
0.0744361 standard
0.140075 standard
0.107131 standard
0.330164 standard
0.307935 standard
0.405991 standard
0.259755 standard
0.0976346 standard
0.0108991 standard
0.242332 standard
0.490481 standard
0.263496 standard
0.543941 standard
1.00001 standard
0.484484 standard
0.0307982 standard
0.06974 standard
0.12259 standard
0.169294 standard
0.179817 standard
0.245267 standard
0.154609 standard
0.18801 standard
0.193139 standard
0.0732906 standard
0.148622 standard
0.0872597 standard
0.0623445 standard
0.0216162 standard
0.0354451 standard
0.0910084 standard
0.11812 standard
0.241228 standard
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0.099105 standard
0.013161 standard
0.00416337 standard
0.254069 standard
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1.0001 standard
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0.16028 standard
0.13018 standard
0.116006 standard
0.0972449 standard
0.155387 standard
0.117317 standard
0.131816 standard
0.180602 standard
0.0827839 standard
0.145707 standard
0.0551299 standard
0.0985867 standard
0.0604206 standard
0.00476333 standard
0.0172462 standard
0.0394047 standard
0.0824364 standard
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0.191543 standard
0.346368 standard
0.335501 standard
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0.263113 standard
0.0910169 standard
0.090171 standard
0.0165201 standard
0.00582345 standard
0.254361 standard
0.497594 standard
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0.514499 standard
1.00045 standard
0.51419 standard
0.044877 standard
0.0673847 standard
0.0780275 standard
0.0913811 standard
0.120751 standard
0.141167 standard
0.15322 standard
0.150181 standard
0.117187 standard
0.0961653 standard
0.0774027 standard
0.153886 standard
0.105262 standard
0.127205 standard
0.18244 standard
0.0942372 standard
0.147403 standard
0.0595092 standard
0.106798 standard
0.0604297 standard
0.002321 standard
0.0181101 standard
0.0443295 standard
0.0555653 standard
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0.0851032 standard
0.0212751 standard
0.0210294 standard
0.00795601 standard
0.254279 standard
0.497359 standard
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0.513903 standard
1.00018 standard
0.513888 standard
0.0488216 standard
0.0684605 standard
0.0841544 standard
0.0940217 standard
0.12308 standard
0.13785 standard
0.147414 standard
0.146311 standard
0.109686 standard
0.0909538 standard
0.0744426 standard
0.152547 standard
0.100574 standard
0.129777 standard
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0.0624115 standard
0.111247 standard
0.0607369 standard
0.0192989 standard
0.0487109 standard
0.0607941 standard
0.075648 standard
0.0492308 standard
0.18436 standard
0.143609 standard
0.220756 standard
0.309197 standard
0.208786 standard
0.326107 standard
0.177455 standard
0.155739 standard
0.0825804 standard
0.042719 standard
0.0280471 standard
0.017459 standard
0.0102299 standard
0.254381 standard
0.497724 standard
0.254552 standard
0.513852 standard
1.00025 standard
0.513925 standard
0.0521499 standard
0.0685954 standard
0.0871061 standard
0.0965193 standard
0.121405 standard
0.1375 standard
0.14605 standard
0.140377 standard
0.105263 standard
0.0872948 standard
0.0728149 standard
0.149489 standard
0.0981794 standard
0.131883 standard
0.178726 standard
0.108351 standard
0.147841 standard
0.0657185 standard
0.113212 standard
0.0609537 standard
0.0204739 standard
0.0527115 standard
0.0654428 standard
0.0737941 standard
0.0544011 standard
0.175201 standard
0.23588 standard
0.247262 standard
0.260577 standard
0.30028 standard
0.210238 standard
0.0817425 standard
0.0485156 standard
0.0344867 standard
0.020022 standard
0.012676 standard
0.254005 standard
0.497051 standard
0.254031 standard
0.51377 standard
1.0 standard
0.513752 standard
0.0532794 standard
0.0695721 standard
0.0916203 standard
0.0993126 standard
0.124153 standard
0.136569 standard
0.144617 standard
0.142847 standard
0.103294 standard
0.0861074 standard
0.07222 standard
0.147129 standard
0.0975249 standard
0.132535 standard
0.176443 standard
0.110309 standard
0.14729 standard
0.066948 standard
0.113829 standard
0.061121 standard
0.0209829 standard
0.0545392 standard
0.0676852 standard
0.0731651 standard
0.0574061 standard
0.171426 standard
0.0751119 standard
0.214918 standard
0.241342 standard
0.213392 standard
0.305506 standard
0.191848 standard
0.195871 standard
0.10557 standard
0.0805774 standard
0.0514871 standard
0.0379357 standard
0.0211439 standard
0.013743 standard
0.254342 standard
0.4971 standard
0.254239 standard
0.51385 standard
1.0 standard
0.513832 standard
0.0543246 standard
0.0699737 standard
0.0909213 standard
0.0988646 standard
0.123337 standard
0.134667 standard
0.141511 standard
0.138147 standard
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0.0852681 standard
0.071702 standard
0.145517 standard
0.097087 standard
0.133407 standard
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0.111907 standard
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0.0687253 standard
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0.0613675 standard
0.0214619 standard
0.0562543 standard
0.0698801 standard
0.0727837 standard
0.0603904 standard
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0.228162 standard
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0.175139 standard
0.102817 standard
0.0806025 standard
0.0538515 standard
0.0410388 standard
0.0221803 standard
0.0147404 standard
0.253847 standard
0.497044 standard
0.254306 standard
0.513839 standard
1.0 standard
0.513821 standard
0.0567043 standard
0.0706271 standard
0.0980494 standard
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0.125879 standard
0.13502 standard
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0.0985733 standard
0.0826078 standard
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0.145752 standard
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0.0617947 standard
0.022369 standard
0.0581578 standard
0.0742942 standard
0.0719165 standard
0.0657324 standard
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0.0776743 standard
0.178681 standard
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0.110986 standard
0.287236 standard
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0.0999351 standard
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0.0795666 standard
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0.0587629 standard
0.0467805 standard
0.0241297 standard
0.0165543 standard
0.254377 standard
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0.254178 standard
0.512888 standard
1.0 standard
0.512872 standard
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0.0710407 standard
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0.142096 standard
0.139483 standard
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0.0706713 standard
0.140422 standard
0.096407 standard
0.133519 standard
0.167037 standard
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0.145496 standard
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0.113942 standard
0.0618745 standard
0.0227821 standard
0.059677 standard
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0.0721565 standard
0.0685188 standard
0.160284 standard
0.0787538 standard
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0.206279 standard
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0.194482 standard
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0.079842 standard
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0.0254934 standard
0.0173733 standard
0.254355 standard
0.497692 standard
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0.513853 standard
1.0 standard
0.513838 standard
0.058043 standard
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0.10024 standard
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0.130772 standard
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0.0259752 standard
0.0181936 standard
0.2545 standard
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0.25425 standard
0.513738 standard
1.0 standard
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0.101727 standard
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0.0238721 standard
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0.0711264 standard
0.0751019 standard
0.155893 standard
0.0842769 standard
0.17132 standard
0.165665 standard
0.0914749 standard
0.165771 standard
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1.0 standard
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0.0709074 standard
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0.157452 standard
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0.0929676 standard
0.0799891 standard
0.08502 standard
0.074352 standard
0.0642201 standard
0.0307157 standard
0.0218779 standard
0.254285 standard
0.497755 standard
0.25429 standard
0.513679 standard
1.0 standard
0.513693 standard
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