Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-Glutamic acid

Simulation outputs:

InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/t3-/m0/s1 Parameter Value
Field strength 600.13(MHz)
RMSD of the fit 0.01754
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/t3-/m0/s1
Note 1 Copied spin matrix from bmse000037

Sample description:

Compound Type Concentration
L-glutamic acid Solute saturatedmM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 0.1%
Show/Hide Spin System Matrix

Spin System Matrix

13 14 11 12 15
13 2.329 -15.894 8.857 6.287 0.046
14 0 2.349 6.734 8.756 0.051
11 0 0 2.119 -14.942 4.733
12 0 0 0 2.05 7.229
15 0 0 0 0 3.748

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.122875 standard
0.264377 standard
0.1986 standard
0.50271 standard
0.615485 standard
0.383112 standard
0.555492 standard
0.293825 standard
0.246503 standard
0.277805 standard
0.404116 standard
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0.406845 standard
0.413957 standard
0.409761 standard
0.401859 standard
0.24411 standard
0.21592 standard
0.172465 standard
0.153156 standard
0.0946744 standard
0.127482 standard
0.0937903 standard
0.825998 standard
0.854936 standard
0.915177 standard
0.939428 standard
1.00056 standard
0.975809 standard
0.717467 standard
0.727388 standard
0.124716 standard
0.0754022 standard
0.780735 standard
0.845683 standard
0.845781 standard
0.781796 standard
0.0301572 standard
0.075668 standard
0.03822 standard
0.186846 standard
0.471039 standard
0.524336 standard
1.0 standard
0.445685 standard
0.119345 standard
0.042282 standard
0.00809512 standard
0.153497 standard
0.191745 standard
0.272187 standard
0.128999 standard
0.116126 standard
0.0146761 standard
0.0888841 standard
0.164575 standard
0.201902 standard
0.487595 standard
0.901549 standard
0.913606 standard
1.0 standard
0.983468 standard
0.70315 standard
0.658992 standard
0.193286 standard
0.277951 standard
0.125008 standard
0.00935825 standard
0.318115 standard
0.658086 standard
0.325034 standard
0.0113141 standard
0.007674 standard
0.0167824 standard
0.10834 standard
0.158387 standard
0.245468 standard
0.515454 standard
0.856832 standard
0.277082 standard
0.682074 standard
0.369556 standard
1.00001 standard
0.521768 standard
0.647717 standard
0.271485 standard
0.19474 standard
0.276323 standard
0.170258 standard
0.340747 standard
0.637917 standard
0.35928 standard
0.00807225 standard
0.0166574 standard
0.107776 standard
0.14911 standard
0.243555 standard
0.419765 standard
0.802273 standard
0.586926 standard
0.154128 standard
1.0 standard
0.461622 standard
0.614485 standard
0.262642 standard
0.178803 standard
0.327248 standard
0.614064 standard
0.342666 standard
0.010023 standard
0.0125652 standard
0.023617 standard
0.124534 standard
0.067082 standard
0.165732 standard
0.279699 standard
0.41878 standard
0.37809 standard
0.799796 standard
0.682201 standard
0.0951501 standard
1.0 standard
0.254804 standard
0.727659 standard
0.295184 standard
0.217926 standard
0.362448 standard
0.640372 standard
0.383735 standard
0.0204158 standard
0.0440592 standard
0.0376279 standard
0.146626 standard
0.39058 standard
0.205415 standard
0.468042 standard
0.28216 standard
0.347496 standard
0.224461 standard
0.0385343 standard
0.0548952 standard
0.0462959 standard
0.0212117 standard
0.0128311 standard
0.024184 standard
0.833266 standard
1.00002 standard
0.306332 standard
0.286407 standard
0.0148751 standard
0.340484 standard
0.39579 standard
0.382127 standard
0.339267 standard
0.041032 standard
0.0945327 standard
0.230678 standard
0.37177 standard
0.196249 standard
0.275745 standard
0.443737 standard
0.370551 standard
0.27592 standard
0.38465 standard
0.268025 standard
0.248613 standard
0.112414 standard
0.0869853 standard
0.0761222 standard
0.0648014 standard
0.0234731 standard
0.0347135 standard
0.923049 standard
1.0 standard
0.398935 standard
0.393465 standard
0.0324527 standard
0.0145925 standard
0.427015 standard
0.476309 standard
0.4722 standard
0.428522 standard
0.0724055 standard
0.166624 standard
0.356468 standard
0.499088 standard
0.331569 standard
0.519414 standard
0.254291 standard
0.46568 standard
0.433916 standard
0.442048 standard
0.338554 standard
0.32433 standard
0.186515 standard
0.159251 standard
0.116076 standard
0.101046 standard
0.0442171 standard
0.0685844 standard
0.804899 standard
0.813986 standard
1.00022 standard
0.998417 standard
0.54227 standard
0.551234 standard
0.0620986 standard
0.0312198 standard
0.590915 standard
0.648627 standard
0.646049 standard
0.591986 standard
0.0994118 standard
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0.439752 standard
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0.320957 standard
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0.260439 standard
0.41732 standard
0.433012 standard
0.377184 standard
0.367791 standard
0.228275 standard
0.201773 standard
0.146918 standard
0.129521 standard
0.0682639 standard
0.09759 standard
0.796414 standard
0.81166 standard
0.909168 standard
0.958989 standard
1.0 standard
0.633504 standard
0.651447 standard
0.0933776 standard
0.0518319 standard
0.697743 standard
0.761617 standard
0.759579 standard
0.697849 standard
0.122847 standard
0.264332 standard
0.198583 standard
0.502651 standard
0.615434 standard
0.380235 standard
0.54344 standard
0.293865 standard
0.246487 standard
0.277793 standard
0.404122 standard
0.402904 standard
0.406829 standard
0.413927 standard
0.409601 standard
0.397016 standard
0.245407 standard
0.215942 standard
0.17246 standard
0.153135 standard
0.0946403 standard
0.127446 standard
0.0937675 standard
0.825948 standard
0.854907 standard
0.915177 standard
0.939422 standard
1.00056 standard
0.975821 standard
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0.72729 standard
0.12468 standard
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0.780641 standard
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0.7817 standard
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0.520486 standard
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0.112094 standard
0.810491 standard
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0.967808 standard
1.00028 standard
0.833937 standard
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0.123841 standard
0.146267 standard
0.0953551 standard
0.802145 standard
0.86875 standard
0.866846 standard
0.801814 standard
0.124772 standard
0.256646 standard
0.191118 standard
0.463396 standard
0.543939 standard
0.327565 standard
0.464025 standard
0.249965 standard
0.216984 standard
0.246092 standard
0.310986 standard
0.310368 standard
0.319311 standard
0.335777 standard
0.372138 standard
0.355389 standard
0.223534 standard
0.211698 standard
0.189928 standard
0.194768 standard
0.16747 standard
0.148961 standard
0.111644 standard
0.14438 standard
0.107465 standard
0.710878 standard
0.954397 standard
0.962078 standard
0.792594 standard
0.869937 standard
1.00031 standard
0.66738 standard
0.116631 standard
0.13591 standard
0.0931443 standard
0.719044 standard
0.777173 standard
0.775106 standard
0.717224 standard
0.100518 standard
0.197389 standard
0.151252 standard
0.363067 standard
0.419106 standard
0.250287 standard
0.341522 standard
0.192694 standard
0.16896 standard
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0.24182 standard
0.240935 standard
0.247029 standard
0.259342 standard
0.287034 standard
0.281378 standard
0.17336 standard
0.160952 standard
0.145342 standard
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0.133676 standard
0.118691 standard
0.0940761 standard
0.119417 standard
0.0903518 standard
0.549855 standard
1.00073 standard
0.634694 standard
0.699893 standard
0.999573 standard
0.523975 standard
0.0977001 standard
0.11312 standard
0.0794249 standard
0.564809 standard
0.609267 standard
0.607788 standard
0.563034 standard
0.104832 standard
0.205731 standard
0.154024 standard
0.363457 standard
0.408948 standard
0.245978 standard
0.33518 standard
0.187017 standard
0.166588 standard
0.189069 standard
0.228896 standard
0.228809 standard
0.234248 standard
0.250014 standard
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0.282122 standard
0.174572 standard
0.159776 standard
0.145691 standard
0.15085 standard
0.1371 standard
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0.105486 standard
0.130233 standard
0.101143 standard
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0.675138 standard
0.928744 standard
1.00182 standard
0.523298 standard
0.110037 standard
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0.0908561 standard
0.565276 standard
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0.36249 standard
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0.106306 standard
0.535494 standard
0.575007 standard
1.00179 standard
0.818849 standard
0.600634 standard
0.525416 standard
0.116252 standard
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0.0966709 standard
0.564848 standard
0.608651 standard
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0.56486 standard
0.144044 standard
0.273636 standard
0.206712 standard
0.477445 standard
0.534893 standard
0.314766 standard
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0.296342 standard
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0.325535 standard
0.374171 standard
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0.204485 standard
0.186048 standard
0.164753 standard
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0.148335 standard
0.702993 standard
0.717896 standard
1.00006 standard
0.759899 standard
0.859073 standard
0.755896 standard
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0.181772 standard
0.135703 standard
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0.809512 standard
0.805649 standard
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0.337371 standard
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0.306678 standard
0.355706 standard
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0.299561 standard
0.265397 standard
0.244165 standard
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0.207326 standard
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0.895638 standard
0.870523 standard
0.782344 standard
0.918862 standard
0.870673 standard
0.864992 standard
0.217125 standard
0.240691 standard
0.184802 standard
0.930839 standard
1.00279 standard
1.0028 standard
0.930886 standard
0.173774 standard
0.314124 standard
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0.533886 standard
0.574851 standard
0.329059 standard
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0.18991 standard
0.207056 standard
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0.703624 standard
0.712649 standard
1.00097 standard
0.749452 standard
0.728692 standard
0.771369 standard
0.222057 standard
0.237801 standard
0.190166 standard
0.830871 standard
0.89853 standard
0.893891 standard
0.835549 standard
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