Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-Isoleucine

Simulation outputs:

InChI=1S/C6H13NO2/c1-3-4(2)5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t4-,5-/m0/s1 Parameter Value
Field strength 600.13(MHz)
RMSD of the fit 0.01197
Temperature 298 K
pH 7.4
InChI InChI=1S/C6H13NO2/c1-3-4(2)5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t4-,5-/m0/s1
Note 1 Copied from spin matrix of bmse000041, just had to fix the chemical shift.
Note 2 Oscar Li

Sample description:

Compound Type Concentration
L-Isoleucine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 1%
Show/Hide Spin System Matrix

Spin System Matrix

10 11 12 16 17 18 13 14 15 19
10 0.93 -12.5 0 0 0 0 0 0 0 0
11 0 0.93 -12.5 0 0 0 0 0 0 0
12 0 0 0.93 0 0 0 0 0 0 0
16 0 0 0 1.46 -13.65 4.704 0 0 0 0
17 0 0 0 0 1.253 9.29 0 0 0 0
18 0 0 0 0 0 1.974 0 0 0 4.057
13 0 0 0 0 0 0 1.002 -12.5 -12.5 0
14 0 0 0 0 0 0 0 1.002 -12.5 0
15 0 0 0 0 0 0 0 0 1.002 0
19 0 0 0 0 0 0 0 0 0 3.66

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.505569 standard
0.998962 standard
0.506013 standard
1.0009 standard
1.00069 standard
0.0189667 standard
0.0573065 standard
0.0282271 standard
0.0693182 standard
0.0663067 standard
0.0804828 standard
0.0594434 standard
0.0713081 standard
0.0791495 standard
0.084952 standard
0.034397 standard
0.0730814 standard
0.0241135 standard
0.0243898 standard
0.0292881 standard
0.0720867 standard
0.0790006 standard
0.081409 standard
0.0883419 standard
0.0784861 standard
0.0685945 standard
0.0655315 standard
0.0582648 standard
0.0237558 standard
0.0197171 standard
0.0127115 standard
0.0226604 standard
0.0402397 standard
0.0315269 standard
0.0639817 standard
0.0639037 standard
0.0730635 standard
0.0782611 standard
0.0770422 standard
0.0729544 standard
0.0631067 standard
0.0623076 standard
0.0312723 standard
0.0391191 standard
0.0220354 standard
0.0123689 standard
0.350477 standard
0.350474 standard
0.31524 standard
1.0 standard
0.758664 standard
0.087 standard
0.141172 standard
0.0733373 standard
0.140422 standard
0.0466563 standard
0.077894 standard
0.0481401 standard
0.051035 standard
0.0480553 standard
0.051695 standard
0.0334351 standard
0.0442534 standard
0.0303791 standard
0.0285471 standard
0.0172151 standard
0.016512 standard
0.00968513 standard
0.00559312 standard
0.00265312 standard
0.242607 standard
0.233007 standard
0.00128613 standard
0.321842 standard
1.0 standard
0.888675 standard
0.0855772 standard
0.055626 standard
0.045012 standard
0.118636 standard
0.104492 standard
0.0913963 standard
0.0923216 standard
0.0984332 standard
0.0869851 standard
0.0354541 standard
0.0367014 standard
0.0348124 standard
0.025056 standard
0.035755 standard
0.0238844 standard
0.04477 standard
0.0450561 standard
0.0495201 standard
0.0506113 standard
0.0384001 standard
0.047951 standard
0.0341462 standard
0.032157 standard
0.019191 standard
0.0193064 standard
0.0111581 standard
0.00633313 standard
0.00232913 standard
0.250059 standard
0.243518 standard
0.00135113 standard
0.459833 standard
0.996171 standard
1.0 standard
0.606488 standard
0.97309 standard
0.0616471 standard
0.0499381 standard
0.042094 standard
0.0865092 standard
0.0695632 standard
0.0696879 standard
0.127126 standard
0.147086 standard
0.125188 standard
0.15314 standard
0.15703 standard
0.118296 standard
0.087467 standard
0.0455673 standard
0.0226164 standard
0.0112763 standard
0.018695 standard
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0.0446691 standard
0.0324781 standard
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0.059309 standard
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0.048586 standard
0.0286021 standard
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0.017068 standard
0.00963725 standard
0.00311412 standard
0.355081 standard
0.347875 standard
0.00194613 standard
0.475381 standard
0.988024 standard
1.00003 standard
0.563333 standard
0.973602 standard
0.0472439 standard
0.0434481 standard
0.0399893 standard
0.0861941 standard
0.0641681 standard
0.0459201 standard
0.1002 standard
0.151318 standard
0.095404 standard
0.203748 standard
0.0966111 standard
0.139258 standard
0.0464304 standard
0.0390131 standard
0.0465762 standard
0.0353171 standard
0.0256361 standard
0.0117211 standard
0.010002 standard
0.015156 standard
0.0226231 standard
0.0451114 standard
0.03326 standard
0.0612551 standard
0.0646501 standard
0.0746979 standard
0.0749342 standard
0.0638576 standard
0.0630584 standard
0.0733643 standard
0.0540984 standard
0.0513952 standard
0.0298422 standard
0.031488 standard
0.0181082 standard
0.010169 standard
0.365163 standard
0.358467 standard
0.00201712 standard
0.482909 standard
0.984743 standard
1.00001 standard
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0.112452 standard
0.045465 standard
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0.046945 standard
0.0371002 standard
0.028306 standard
0.012417 standard
0.0102941 standard
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0.0227543 standard
0.0450136 standard
0.033564 standard
0.06213 standard
0.0652751 standard
0.0759135 standard
0.076136 standard
0.0654096 standard
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0.0746982 standard
0.0556624 standard
0.0529596 standard
0.0304971 standard
0.0325781 standard
0.018696 standard
0.0104915 standard
0.369133 standard
0.362391 standard
0.493914 standard
0.977476 standard
0.540946 standard
1.00001 standard
0.976965 standard
0.0155721 standard
0.0415675 standard
0.0224296 standard
0.0520069 standard
0.051711 standard
0.081808 standard
0.0584494 standard
0.0593149 standard
0.0845784 standard
0.0964172 standard
0.0389907 standard
0.085829 standard
0.0399143 standard
0.0346099 standard
0.0764174 standard
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0.997656 standard
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1.00013 standard
0.997642 standard
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0.0251892 standard
0.0602334 standard
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0.0370548 standard
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0.0266533 standard
0.0254826 standard
0.031987 standard
0.0744581 standard
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0.0831385 standard
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0.0711074 standard
0.0622982 standard
0.0565829 standard
0.0513371 standard
0.0203836 standard
0.0173959 standard
0.013307 standard
0.0230223 standard
0.0421211 standard
0.0325895 standard
0.0648092 standard
0.0652385 standard
0.0752407 standard
0.0789617 standard
0.0753323 standard
0.0746045 standard
0.0617625 standard
0.0607663 standard
0.0314697 standard
0.037448 standard
0.0215099 standard
0.0118849 standard
0.361138 standard
0.361138 standard
0.505686 standard
0.999103 standard
0.507417 standard
1.00061 standard
0.999787 standard
0.017629 standard
0.0526665 standard
0.0266272 standard
0.0642412 standard
0.0630912 standard
0.0812078 standard
0.0592094 standard
0.0685996 standard
0.0812225 standard
0.0883161 standard
0.0356618 standard
0.0767765 standard
0.0253952 standard
0.0247426 standard
0.0307143 standard
0.0727789 standard
0.0827174 standard
0.0818568 standard
0.0911342 standard
0.0747324 standard
0.065313 standard
0.0609971 standard
0.0545148 standard
0.0220179 standard
0.0184803 standard
0.0130732 standard
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0.041428 standard
0.0323677 standard
0.0643747 standard
0.0647395 standard
0.0749871 standard
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0.0767791 standard
0.0744603 standard
0.0620932 standard
0.0623399 standard
0.0314651 standard
0.0377928 standard
0.0220375 standard
0.011998 standard
0.356735 standard
0.356992 standard
0.505433 standard
0.998632 standard
0.506239 standard
1.00084 standard
1.00046 standard
0.0182637 standard
0.0549211 standard
0.0276012 standard
0.0665671 standard
0.0652477 standard
0.0803928 standard
0.059372 standard
0.0700987 standard
0.0799924 standard
0.0860589 standard
0.0349602 standard
0.0744271 standard
0.0245673 standard
0.0247575 standard
0.0297743 standard
0.0731181 standard
0.0800844 standard
0.0823619 standard
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0.0773444 standard
0.0671109 standard
0.0640322 standard
0.0566462 standard
0.023169 standard
0.0191793 standard
0.0127971 standard
0.0230133 standard
0.0405101 standard
0.031976 standard
0.0649698 standard
0.0641632 standard
0.0743646 standard
0.0790335 standard
0.0770878 standard
0.0742404 standard
0.0628964 standard
0.062352 standard
0.0315941 standard
0.0387646 standard
0.022057 standard
0.0122821 standard
0.352736 standard
0.35273 standard
0.506096 standard
1.0 standard
0.506541 standard
1.00038 standard
1.00017 standard
0.0189713 standard
0.0573249 standard
0.0282487 standard
0.0693251 standard
0.066336 standard
0.0804892 standard
0.0594737 standard
0.0713014 standard
0.0791892 standard
0.084973 standard
0.0344262 standard
0.0731078 standard
0.0241202 standard
0.0243972 standard
0.0292934 standard
0.0721061 standard
0.0790277 standard
0.0814123 standard
0.0883716 standard
0.0785135 standard
0.0685883 standard
0.0655539 standard
0.0582784 standard
0.0237596 standard
0.0197222 standard
0.0127153 standard
0.0226666 standard
0.040256 standard
0.0315387 standard
0.0640052 standard
0.0638987 standard
0.0730912 standard
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0.0770426 standard
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0.0631004 standard
0.0623311 standard
0.0312833 standard
0.0391343 standard
0.0220411 standard
0.0123725 standard
0.350575 standard
0.350572 standard
0.505497 standard
0.998852 standard
0.50577 standard
1.00012 standard
0.999996 standard
0.0196222 standard
0.0594552 standard
0.0292263 standard
0.0713364 standard
0.0678334 standard
0.0810808 standard
0.0601141 standard
0.0719983 standard
0.0797799 standard
0.0830894 standard
0.0341674 standard
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0.0710103 standard
0.0778031 standard
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0.0788895 standard
0.0697295 standard
0.0661744 standard
0.0591095 standard
0.0241119 standard
0.0199913 standard
0.012504 standard
0.0227086 standard
0.0394728 standard
0.0317976 standard
0.064118 standard
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0.0745334 standard
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0.0746924 standard
0.0633258 standard
0.0640341 standard
0.0320171 standard
0.0396602 standard
0.0226013 standard
0.0125298 standard
0.347347 standard
0.347347 standard
0.506011 standard
0.999907 standard
0.50623 standard
1.00083 standard
1.00072 standard
0.0197776 standard
0.059804 standard
0.0289645 standard
0.0720074 standard
0.0679402 standard
0.0814896 standard
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0.0829797 standard
0.034099 standard
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0.0286797 standard
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0.0872666 standard
0.0793105 standard
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0.0596521 standard
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0.02018 standard
0.012506 standard
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0.0630097 standard
0.0314474 standard
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0.022373 standard
0.012495 standard
0.347238 standard
0.347238 standard
0.50604 standard
1.0 standard
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1.00073 standard
1.00064 standard
0.0199072 standard
0.0602528 standard
0.0292793 standard
0.0722331 standard
0.0684982 standard
0.0810512 standard
0.059404 standard
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0.0794567 standard
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0.034122 standard
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0.0313353 standard
0.0395882 standard
0.022526 standard
0.0125013 standard
0.347067 standard
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0.505843 standard
0.999585 standard
0.505967 standard
1.00082 standard
1.00076 standard
0.0201149 standard
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0.0289739 standard
0.07242 standard
0.0686494 standard
0.0807071 standard
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0.023686 standard
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0.020543 standard
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0.02184 standard
0.0394788 standard
0.0314486 standard
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0.0638025 standard
0.0315856 standard
0.0394563 standard
0.0224928 standard
0.0124835 standard
0.346499 standard
0.346499 standard
0.506006 standard
1.0 standard
0.506112 standard
0.999961 standard
0.999912 standard
0.0202126 standard
0.0613452 standard
0.0301358 standard
0.0730464 standard
0.0699031 standard
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1.00081 standard
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0.0645915 standard
0.0308837 standard
0.0393834 standard
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0.345573 standard
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0.506029 standard
1.0 standard
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0.999778 standard
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0.345328 standard
0.345328 standard
0.50578 standard
1.0 standard
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1.00033 standard
1.00031 standard
0.0206696 standard
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0.0303998 standard
0.0748533 standard
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0.0224411 standard
0.0123758 standard
0.344961 standard
0.344961 standard
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