Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Histamine

Simulation outputs:

InChI=1S/C5H9N3/c6-2-1-5-3-7-4-8-5/h3-4H,1-2,6H2,(H,7,8) Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.00916
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H9N3/c6-2-1-5-3-7-4-8-5/h3-4H,1-2,6H2,(H,7,8)
pKa 6.04
pKa 9.75
Note 1 9,10?11,12

Sample description:

Compound Type Concentration
Histamine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

13 14 9 10 11 12
13 7.11 1.182 0 0 0 0
14 0 7.903 0 0 0 0
9 0 0 3.006 -13.03 7.213 6.023
10 0 0 0 3.006 8.103 6.824
11 0 0 0 0 3.284 -12.675
12 0 0 0 0 0 3.284

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.44566 standard
0.998692 standard
0.574398 standard
0.586844 standard
1.0 standard
0.431018 standard
0.648382 standard
0.648382 standard
0.648382 standard
0.648382 standard
0.0769393 standard
0.177 standard
0.870762 standard
0.792105 standard
0.970924 standard
1.0 standard
0.817836 standard
0.888581 standard
0.174218 standard
0.0767882 standard
0.725434 standard
0.753741 standard
0.753726 standard
0.725419 standard
0.166406 standard
0.251339 standard
0.237882 standard
0.854689 standard
0.948606 standard
0.98691 standard
0.345311 standard
0.986741 standard
0.958812 standard
0.943444 standard
0.237948 standard
0.251572 standard
0.165944 standard
0.99363 standard
1.0 standard
0.999996 standard
0.993621 standard
0.218989 standard
0.280105 standard
0.327181 standard
0.953226 standard
0.828282 standard
0.935056 standard
0.0513309 standard
0.932402 standard
0.830494 standard
0.972998 standard
0.326971 standard
0.279899 standard
0.218327 standard
1.00002 standard
1.00003 standard
1.00002 standard
1.00002 standard
0.241411 standard
0.294534 standard
0.369715 standard
0.962068 standard
0.796306 standard
0.886113 standard
0.0376872 standard
0.888155 standard
0.802293 standard
0.976672 standard
0.368741 standard
0.294206 standard
0.240591 standard
1.0 standard
1.0 standard
1.0 standard
0.999997 standard
0.261422 standard
0.307674 standard
0.409944 standard
0.969265 standard
0.774307 standard
0.848187 standard
0.031231 standard
0.853546 standard
0.783255 standard
0.979137 standard
0.408641 standard
0.307133 standard
0.260385 standard
1.00006 standard
1.00006 standard
1.00006 standard
1.00005 standard
0.371681 standard
0.385039 standard
0.998639 standard
0.690212 standard
0.699219 standard
0.706489 standard
0.698536 standard
1.00019 standard
0.378497 standard
0.36433 standard
0.905 standard
0.905001 standard
0.905 standard
0.905 standard
0.414829 standard
0.417616 standard
0.99703 standard
0.647869 standard
0.661074 standard
1.00002 standard
0.409139 standard
0.405534 standard
0.781204 standard
0.781204 standard
0.781204 standard
0.781204 standard
0.442477 standard
0.99862 standard
0.597365 standard
0.610916 standard
1.00001 standard
0.429452 standard
0.69575 standard
0.69575 standard
0.69575 standard
0.69575 standard
0.445656 standard
0.998674 standard
0.574376 standard
0.586832 standard
1.0 standard
0.445067 standard
0.64836 standard
0.64836 standard
0.64836 standard
0.64836 standard
0.445938 standard
1.00047 standard
0.543138 standard
0.557188 standard
0.986856 standard
0.445379 standard
0.623006 standard
0.623006 standard
0.623006 standard
0.623006 standard
0.44856 standard
0.999612 standard
0.551099 standard
0.550533 standard
1.00095 standard
0.464089 standard
0.616924 standard
0.616924 standard
0.616924 standard
0.616924 standard
0.475183 standard
1.0 standard
0.542573 standard
0.555111 standard
0.988143 standard
0.459411 standard
0.612478 standard
0.612478 standard
0.612478 standard
0.612478 standard
0.461837 standard
0.984121 standard
0.537423 standard
0.536716 standard
1.0 standard
0.444646 standard
0.596297 standard
0.596297 standard
0.606797 standard
0.606797 standard
0.477798 standard
0.992292 standard
0.544685 standard
0.532922 standard
1.0 standard
0.461196 standard
0.603492 standard
0.603492 standard
0.592526 standard
0.592526 standard
0.475936 standard
1.0019 standard
0.540717 standard
0.527809 standard
0.993381 standard
0.457748 standard
0.605494 standard
0.605494 standard
0.605494 standard
0.605494 standard
0.476171 standard
1.00079 standard
0.525922 standard
0.538672 standard
1.00208 standard
0.456184 standard
0.598122 standard
0.598122 standard
0.598122 standard
0.598122 standard
0.489339 standard
0.99075 standard
0.530288 standard
0.529531 standard
1.0093 standard
0.474146 standard
0.593696 standard
0.593696 standard
0.608878 standard
0.608878 standard
0.498342 standard
1.0111 standard
0.526312 standard
0.525198 standard
1.01236 standard
0.477599 standard
0.603411 standard
0.603411 standard
0.588148 standard
0.588148 standard
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