Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Ethylmalonic acid

Simulation outputs:

InChI=1S/C5H8O4/c1-2-3(4(6)7)5(8)9/h3H,2H2,1H3,(H,6,7)(H,8,9) Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.02072
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H8O4/c1-2-3(4(6)7)5(8)9/h3H,2H2,1H3,(H,6,7)(H,8,9)
Note 1 Oscar Li

Sample description:

Compound Type Concentration
ethylmalonic acid Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

10 11 12 13 14 15
10 0.779 -12.4 0 7.333 7.333 0
11 0 0.779 0 7.333 7.333 0
12 0 0 0.779 7.333 7.333 0
13 0 0 0 1.613 -12.4 7.45
14 0 0 0 0 1.613 7.45
15 0 0 0 0 0 2.887

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

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PPM Amplitude Peak Type
0.502405 standard
1.00057 standard
0.519806 standard
0.092986 standard
0.341518 standard
0.49809 standard
0.335255 standard
0.0886456 standard
0.170829 standard
0.333904 standard
0.170985 standard
0.299046 standard
1.0 standard
0.734546 standard
0.17762 standard
0.425212 standard
0.409735 standard
0.26647 standard
0.0659851 standard
0.0618211 standard
0.278242 standard
0.335419 standard
0.153482 standard
0.35993 standard
1.0 standard
0.674798 standard
0.137028 standard
0.379394 standard
0.445535 standard
0.281772 standard
0.0730891 standard
0.253837 standard
0.360845 standard
0.173546 standard
0.39056 standard
1.0 standard
0.624136 standard
0.12158 standard
0.35549 standard
0.455762 standard
0.286646 standard
0.076063 standard
0.228255 standard
0.357911 standard
0.172512 standard
0.400162 standard
1.0 standard
0.60625 standard
0.116633 standard
0.349027 standard
0.45754 standard
0.288583 standard
0.076757 standard
0.218432 standard
0.353021 standard
0.170382 standard
0.409573 standard
1.00001 standard
0.593101 standard
0.113337 standard
0.345852 standard
0.461227 standard
0.291873 standard
0.077772 standard
0.211409 standard
0.351607 standard
0.169072 standard
0.461984 standard
1.00001 standard
0.547868 standard
0.10039 standard
0.346487 standard
0.484394 standard
0.312863 standard
0.083006 standard
0.181953 standard
0.338237 standard
0.168855 standard
0.479704 standard
1.00003 standard
0.537143 standard
0.0980102 standard
0.348745 standard
0.494472 standard
0.321561 standard
0.0855463 standard
0.173426 standard
0.335992 standard
0.172595 standard
0.49197 standard
1.00002 standard
0.528363 standard
0.0959477 standard
0.346325 standard
0.497044 standard
0.32739 standard
0.0860629 standard
0.171557 standard
0.334808 standard
0.171648 standard
0.503528 standard
1.00058 standard
0.520908 standard
0.0931871 standard
0.342269 standard
0.49919 standard
0.335995 standard
0.0888378 standard
0.171227 standard
0.334669 standard
0.171364 standard
0.507289 standard
1.0 standard
0.513068 standard
0.0926908 standard
0.337359 standard
0.500348 standard
0.337185 standard
0.0890118 standard
0.170776 standard
0.334055 standard
0.170774 standard
0.50786 standard
1.0 standard
0.51396 standard
0.0908461 standard
0.338061 standard
0.501148 standard
0.33886 standard
0.0909034 standard
0.171061 standard
0.334415 standard
0.171059 standard
0.507626 standard
1.00009 standard
0.514179 standard
0.0907421 standard
0.335928 standard
0.502129 standard
0.342572 standard
0.091246 standard
0.171009 standard
0.333465 standard
0.171122 standard
0.51035 standard
1.0015 standard
0.510349 standard
0.0908134 standard
0.335947 standard
0.500369 standard
0.338308 standard
0.0907521 standard
0.170369 standard
0.333074 standard
0.17049 standard
0.511161 standard
1.0019 standard
0.512695 standard
0.090935 standard
0.337147 standard
0.502142 standard
0.34002 standard
0.0910144 standard
0.17093 standard
0.332919 standard
0.170793 standard
0.512614 standard
1.00211 standard
0.511609 standard
0.0910324 standard
0.338487 standard
0.502094 standard
0.339637 standard
0.0911549 standard
0.171031 standard
0.334755 standard
0.171031 standard
0.512682 standard
1.00233 standard
0.512925 standard
0.0911636 standard
0.33848 standard
0.501813 standard
0.339404 standard
0.091287 standard
0.171076 standard
0.334827 standard
0.171075 standard
0.513342 standard
1.0028 standard
0.513341 standard
0.0911435 standard
0.340127 standard
0.502432 standard
0.340128 standard
0.0911438 standard
0.171351 standard
0.335325 standard
0.171351 standard
0.514063 standard
1.00385 standard
0.514063 standard
0.0915188 standard
0.341164 standard
0.505764 standard
0.339681 standard
0.0912136 standard
0.171587 standard
0.335564 standard
0.171587 standard
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