Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Acetaldehyde-oxime-mixture

Simulation outputs:

InChI=1S/C2H5NO/c1-2-3-4/h2,4H,1H3/b3-2+ Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.02098
Temperature 298 K
pH 7.4
InChI InChI=1S/C2H5NO/c1-2-3-4/h2,4H,1H3/b3-2+
Note 1 mixture
Note 2 spin_simulatioin_a.xml
Note 3 spin_simulatioin_b.xml
Note 4 qm
Note 5 Anti lower energy (larger peaks)

Sample description:

Compound Type Concentration
Acetaldehyde oxime mixture Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

5 6 7 8
5 1.849 -14.9 -14.9 5.681
6 0 1.849 -14.9 5.681
7 0 0 1.849 5.681
8 0 0 0 6.959

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
1.00006 standard
1.00007 standard
0.0933264 standard
0.254272 standard
0.254302 standard
0.0933274 standard
0.953114 standard
1.0 standard
0.0980663 standard
0.251213 standard
0.241741 standard
0.0847682 standard
0.980247 standard
1.00001 standard
0.09232 standard
0.251611 standard
0.245715 standard
0.092115 standard
0.992648 standard
1.0 standard
0.0927736 standard
0.248353 standard
0.256175 standard
0.0930356 standard
0.994354 standard
1.0 standard
0.092895 standard
0.25043 standard
0.25607 standard
0.093049 standard
0.999883 standard
1.0 standard
0.0932189 standard
0.253806 standard
0.253949 standard
0.0932098 standard
1.00006 standard
0.99558 standard
0.0929762 standard
0.248067 standard
0.253995 standard
0.0931478 standard
0.999376 standard
1.0001 standard
0.0931558 standard
0.254106 standard
0.254282 standard
0.0932391 standard
1.00007 standard
1.00007 standard
0.0932118 standard
0.254237 standard
0.254191 standard
0.0932647 standard
1.00007 standard
1.00007 standard
0.0933216 standard
0.254305 standard
0.254305 standard
0.0933216 standard
0.998876 standard
1.00007 standard
0.0930476 standard
0.254246 standard
0.254246 standard
0.0930476 standard
0.999475 standard
1.00007 standard
0.0932843 standard
0.254024 standard
0.254164 standard
0.0931003 standard
0.999991 standard
1.00007 standard
0.0933644 standard
0.254473 standard
0.254215 standard
0.093169 standard
1.00007 standard
1.00007 standard
0.0930022 standard
0.24906 standard
0.253735 standard
0.0929468 standard
1.00007 standard
1.00007 standard
0.0932223 standard
0.253627 standard
0.254024 standard
0.0929914 standard
1.00007 standard
1.00007 standard
0.0932355 standard
0.251067 standard
0.253971 standard
0.093101 standard
0.998598 standard
1.00007 standard
0.092883 standard
0.253853 standard
0.254296 standard
0.0932816 standard
1.00007 standard
0.998562 standard
0.0932532 standard
0.254375 standard
0.254375 standard
0.0932532 standard
1.00007 standard
0.994004 standard
0.093137 standard
0.251217 standard
0.254234 standard
0.0932373 standard
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