Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Acetyl-L-carnitine

Simulation outputs:

InChI=1S/C9H17NO4/c1-7(11)14-8(5-9(12)13)6-10(2,3)4/h8H,5-6H2,1-4H3/t8-/m1/s1 Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.01866
Temperature 298 K
pH 7.4
InChI InChI=1S/C9H17NO4/c1-7(11)14-8(5-9(12)13)6-10(2,3)4/h8H,5-6H2,1-4H3/t8-/m1/s1
pKa 4.09StrongestAcidic(HMDB00201)
pKa -7StrongestBasic(HMDB00201)
Note 1 27-30 assigned using qm

Sample description:

Compound Type Concentration
Acetyl-L-carnitine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

15 16 17 31 27 28 29 30 18 19 20 21 22 23 24 25 26
15 2.129 -14.9 -14.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
16 0 2.129 -14.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 0 0 2.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0
31 0 0 0 5.598 7.778 5.581 1.368 8.823 0 0 0 0 0 0 0 0 0
27 0 0 0 0 2.496 -15.686 0 0 0 0 0 0 0 0 0 0 0
28 0 0 0 0 0 2.63 0 0 0 0 0 0 0 0 0 0 0
29 0 0 0 0 0 0 3.6 -14.992 0 0 0 0 0 0 0 0 0
30 0 0 0 0 0 0 0 3.844 0 0 0 0 0 0 0 0 0
18 0 0 0 0 0 0 0 0 3.183 -12.5 -12.5 0 0 0 0 0 0
19 0 0 0 0 0 0 0 0 0 3.183 -12.5 0 0 0 0 0 0
20 0 0 0 0 0 0 0 0 0 0 3.183 0 0 0 0 0 0
21 0 0 0 0 0 0 0 0 0 0 0 3.183 -12.5 -12.5 0 0 0
22 0 0 0 0 0 0 0 0 0 0 0 0 3.183 -12.5 0 0 0
23 0 0 0 0 0 0 0 0 0 0 0 0 0 3.183 0 0 0
24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.183 -12.5 -12.5
25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.183 -12.5
26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.183

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.384006 standard
0.0221511 standard
0.0224441 standard
0.035019 standard
0.0349152 standard
0.0352341 standard
0.0355707 standard
0.0227422 standard
0.0223008 standard
1.0 standard
0.0333596 standard
0.0335114 standard
0.0431941 standard
0.0430612 standard
0.0318091 standard
0.0321881 standard
0.0255804 standard
0.0250361 standard
0.0105266 standard
0.0107984 standard
0.022527 standard
0.022544 standard
0.0108094 standard
0.0105346 standard
0.384881 standard
0.0726191 standard
0.073556 standard
0.114958 standard
0.0114181 standard
1.0 standard
0.0865081 standard
0.0703483 standard
0.057971 standard
0.00379012 standard
0.0101921 standard
0.00104013 standard
0.00150313 standard
0.0110411 standard
0.0112561 standard
0.0226571 standard
0.0217341 standard
0.0208451 standard
0.0190991 standard
0.00841013 standard
0.00702012 standard
0.000886125 standard
0.384334 standard
0.00616113 standard
0.0593401 standard
0.0617074 standard
0.0797652 standard
0.078937 standard
0.00726012 standard
0.00662813 standard
1.0 standard
0.0136061 standard
0.0160111 standard
0.0604292 standard
0.0828413 standard
0.050842 standard
0.00643112 standard
0.0125881 standard
0.000522125 standard
0.000781125 standard
0.0102041 standard
0.0106361 standard
0.0228051 standard
0.0206081 standard
0.0197381 standard
0.0207611 standard
0.00868612 standard
0.00769513 standard
0.384126 standard
0.00773625 standard
0.00658113 standard
0.0536644 standard
0.058179 standard
0.0650093 standard
0.0618253 standard
0.007883 standard
0.00623012 standard
1.0 standard
0.0138251 standard
0.0167172 standard
0.055916 standard
0.0548401 standard
0.0493053 standard
0.0467442 standard
0.00953925 standard
0.014716 standard
0.0101402 standard
0.0105881 standard
0.025246 standard
0.0201321 standard
0.0191791 standard
0.0235462 standard
0.00895225 standard
0.00822313 standard
0.384086 standard
0.00792712 standard
0.00720412 standard
0.0518082 standard
0.0594111 standard
0.063793 standard
0.0580592 standard
0.00850013 standard
0.00672612 standard
1.0 standard
0.0151062 standard
0.017712 standard
0.0546292 standard
0.0531034 standard
0.0464284 standard
0.0452137 standard
0.0109681 standard
0.0156212 standard
0.0101712 standard
0.0106061 standard
0.0254151 standard
0.0240762 standard
0.00922013 standard
0.008471 standard
0.38406 standard
0.00841225 standard
0.00791125 standard
0.0502493 standard
0.0652312 standard
0.0675726 standard
0.0553914 standard
0.00917625 standard
0.00724913 standard
1.0 standard
0.016408 standard
0.0187334 standard
0.0538673 standard
0.0521014 standard
0.0445907 standard
0.0438877 standard
0.012327 standard
0.016428 standard
0.0100421 standard
0.0104781 standard
0.025391 standard
0.0241561 standard
0.00936912 standard
0.00878125 standard
0.384002 standard
0.0148471 standard
0.0146493 standard
0.0426826 standard
0.043798 standard
0.0435215 standard
0.0439991 standard
0.015403 standard
0.0142656 standard
1.0 standard
0.0260413 standard
0.026754 standard
0.0481275 standard
0.0474466 standard
0.0365191 standard
0.037245 standard
0.0198628 standard
0.0212901 standard
0.0103381 standard
0.0107141 standard
0.022275 standard
0.022403 standard
0.022225 standard
0.0217274 standard
0.01027 standard
0.00991212 standard
0.384001 standard
0.0185401 standard
0.0186281 standard
0.0387421 standard
0.0390112 standard
0.0390951 standard
0.0396178 standard
0.0190998 standard
0.0183677 standard
1.0 standard
0.0301632 standard
0.0305197 standard
0.045448 standard
0.0451046 standard
0.0342571 standard
0.0342181 standard
0.0232475 standard
0.0230091 standard
0.010321 standard
0.0106336 standard
0.0224404 standard
0.0223094 standard
0.0106377 standard
0.010323 standard
0.384004 standard
0.0207281 standard
0.020948 standard
0.036471 standard
0.0364912 standard
0.0367301 standard
0.0371347 standard
0.0213072 standard
0.0207667 standard
1.0 standard
0.0326809 standard
0.0328805 standard
0.0444013 standard
0.0442097 standard
0.0327351 standard
0.0329731 standard
0.0246894 standard
0.0242471 standard
0.0104059 standard
0.0107027 standard
0.0224711 standard
0.0223632 standard
0.0107069 standard
0.0104089 standard
0.384006 standard
0.0221531 standard
0.022445 standard
0.035016 standard
0.0349122 standard
0.035232 standard
0.0355677 standard
0.0227432 standard
0.0223027 standard
1.0 standard
0.0338571 standard
0.0339973 standard
0.0431871 standard
0.0430543 standard
0.0318071 standard
0.0321861 standard
0.0255805 standard
0.0250371 standard
0.0103781 standard
0.0106826 standard
0.022524 standard
0.02254 standard
0.0108074 standard
0.0105326 standard
0.384008 standard
0.0231311 standard
0.023464 standard
0.034027 standard
0.0338512 standard
0.034191 standard
0.0344867 standard
0.0237293 standard
0.0233498 standard
1.0 standard
0.0348314 standard
0.0349348 standard
0.0426723 standard
0.0425737 standard
0.0312191 standard
0.0316651 standard
0.0261374 standard
0.0255551 standard
0.010596 standard
0.0108592 standard
0.0225657 standard
0.0224994 standard
0.0108612 standard
0.010598 standard
0.38401 standard
0.0238511 standard
0.024206 standard
0.033309 standard
0.0330872 standard
0.0334801 standard
0.0337457 standard
0.0244563 standard
0.0241209 standard
1.0 standard
0.0351616 standard
0.0352495 standard
0.0418553 standard
0.0417728 standard
0.0307971 standard
0.0312932 standard
0.0265443 standard
0.0259321 standard
0.0105351 standard
0.0108123 standard
0.0224192 standard
0.0224397 standard
0.0108014 standard
0.0105291 standard
0.384011 standard
0.0241381 standard
0.024505 standard
0.033015 standard
0.0327742 standard
0.03317 standard
0.0334277 standard
0.0247443 standard
0.0244208 standard
1.0 standard
0.0359428 standard
0.0360145 standard
0.0413213 standard
0.0412422 standard
0.0306251 standard
0.0311412 standard
0.0267103 standard
0.0260881 standard
0.0104549 standard
0.0107479 standard
0.0224846 standard
0.0227194 standard
0.010733 standard
0.0104451 standard
0.384012 standard
0.0243972 standard
0.024763 standard
0.032748 standard
0.0324962 standard
0.0329151 standard
0.0331647 standard
0.0249923 standard
0.0246768 standard
1.0 standard
0.0351467 standard
0.0352258 standard
0.0409452 standard
0.0408702 standard
0.0304821 standard
0.0310082 standard
0.0268463 standard
0.0262191 standard
0.010662 standard
0.0109112 standard
0.0226915 standard
0.022254 standard
0.010703 standard
0.0104055 standard
0.384013 standard
0.0248291 standard
0.025202 standard
0.032317 standard
0.0320442 standard
0.032446 standard
0.0326866 standard
0.0254494 standard
0.0251559 standard
1.0 standard
0.0354704 standard
0.0355403 standard
0.0406306 standard
0.040565 standard
0.0302431 standard
0.0307791 standard
0.0270733 standard
0.0264491 standard
0.010406 standard
0.010704 standard
0.0222053 standard
0.0226708 standard
0.0109424 standard
0.0106969 standard
0.384013 standard
0.0250061 standard
0.025387 standard
0.032142 standard
0.0318592 standard
0.03228 standard
0.0325146 standard
0.0256033 standard
0.0253138 standard
1.0 standard
0.0368477 standard
0.0369 standard
0.0418941 standard
0.0418457 standard
0.0301311 standard
0.0307022 standard
0.0271943 standard
0.0265361 standard
0.0104463 standard
0.0107331 standard
0.0227967 standard
0.0223686 standard
0.0109956 standard
0.0107654 standard
0.384014 standard
0.0251802 standard
0.025559 standard
0.031962 standard
0.0316712 standard
0.032112 standard
0.0323417 standard
0.0257924 standard
0.0255139 standard
1.0 standard
0.0361557 standard
0.0362147 standard
0.0408553 standard
0.0408 standard
0.0300391 standard
0.0305942 standard
0.0272623 standard
0.0266321 standard
0.0108803 standard
0.0110858 standard
0.0225198 standard
0.0223896 standard
0.0108131 standard
0.010535 standard
0.384015 standard
0.0254662 standard
0.025859 standard
0.031683 standard
0.0313712 standard
0.031813 standard
0.0320366 standard
0.0260754 standard
0.0258079 standard
1.0 standard
0.0360353 standard
0.0360919 standard
0.0416813 standard
0.0416399 standard
0.0298811 standard
0.0304762 standard
0.0274443 standard
0.0267741 standard
0.010439 standard
0.0107292 standard
0.0225992 standard
0.0225697 standard
0.0110178 standard
0.0108009 standard
0.384016 standard
0.0258951 standard
0.026295 standard
0.031254 standard
0.0309282 standard
0.0313651 standard
0.0315786 standard
0.0265244 standard
0.0262739 standard
1.0 standard
0.0363477 standard
0.0363979 standard
0.0399383 standard
0.0398913 standard
0.0296301 standard
0.0302542 standard
0.0276894 standard
0.0270001 standard
0.0108788 standard
0.0110792 standard
0.0223263 standard
0.0225693 standard
0.0110923 standard
0.0108892 standard
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