Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

DL-homocysteine

Simulation outputs:

InChI=1S/C4H9NO2S/c5-3(1-2-8)4(6)7/h3,8H,1-2,5H2,(H,6,7)/t3-/m1/s1 Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.01395
Temperature 298 K
pH 7.4
InChI InChI=1S/C4H9NO2S/c5-3(1-2-8)4(6)7/h3,8H,1-2,5H2,(H,6,7)/t3-/m1/s1
Note 1 None

Sample description:

Compound Type Concentration
DL-HOMOCYSTEINE Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

9 10 11 12 13
9 2.115 -14.356 6.519 8.381 7.482
10 0 2.168 8.625 6.32 5.344
11 0 0 2.624 -13.399 0
12 0 0 0 2.665 0
13 0 0 0 0 3.869

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

To zoom into a region, draw a box around it.
Hover over the x/y-axis and use mouse-wheel to zoom in/out.
Hover over the x/y-axis hold down left-button to move around the spectra.
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PPM Amplitude Peak Type
0.11783 standard
0.235521 standard
0.516979 standard
0.697868 standard
0.720816 standard
0.466199 standard
0.782394 standard
0.438649 standard
0.446252 standard
0.553386 standard
0.56129 standard
0.502437 standard
0.198341 standard
0.148717 standard
0.183465 standard
0.179929 standard
0.129759 standard
0.2256 standard
0.268605 standard
0.242685 standard
0.767626 standard
0.838652 standard
0.875237 standard
0.80656 standard
0.742463 standard
0.856285 standard
0.80968 standard
0.708087 standard
0.242446 standard
0.257732 standard
0.192546 standard
0.898971 standard
1.0001 standard
1.00016 standard
0.898966 standard
0.098368 standard
0.13351 standard
0.240895 standard
0.450726 standard
0.341282 standard
0.896901 standard
0.53347 standard
0.578904 standard
1.0 standard
0.755671 standard
0.237496 standard
0.168933 standard
0.26034 standard
0.164819 standard
0.342634 standard
0.675623 standard
0.302327 standard
0.148271 standard
0.179781 standard
0.380757 standard
0.56282 standard
0.346213 standard
0.318066 standard
0.806437 standard
0.486325 standard
0.52684 standard
0.0400701 standard
1.0 standard
0.921874 standard
0.496041 standard
0.350463 standard
0.285534 standard
0.428715 standard
0.719602 standard
0.404724 standard
0.006667 standard
0.0106571 standard
0.0133042 standard
0.14752 standard
0.169 standard
0.391352 standard
0.480992 standard
0.753585 standard
0.500193 standard
0.0496644 standard
0.028382 standard
0.0265953 standard
0.022062 standard
0.0210851 standard
1.0 standard
0.870319 standard
0.569622 standard
0.341826 standard
0.305697 standard
0.420783 standard
0.624377 standard
0.370311 standard
0.00743925 standard
0.0118061 standard
0.0141361 standard
0.150844 standard
0.169856 standard
0.40459 standard
0.461209 standard
0.701608 standard
0.504537 standard
0.029879 standard
0.017925 standard
0.0252936 standard
0.019246 standard
1.0 standard
0.894905 standard
0.588064 standard
0.348631 standard
0.318697 standard
0.42349 standard
0.604443 standard
0.368426 standard
0.00841104 standard
0.015528 standard
0.015526 standard
0.155377 standard
0.172441 standard
0.414462 standard
0.4466 standard
0.65661 standard
0.5203 standard
0.0260121 standard
0.0156581 standard
0.0270832 standard
1.00003 standard
0.934103 standard
0.593621 standard
0.356957 standard
0.329448 standard
0.0255482 standard
0.006802 standard
0.420413 standard
0.582829 standard
0.371525 standard
0.0295221 standard
0.06703 standard
0.024749 standard
0.265788 standard
0.285659 standard
0.608878 standard
0.386979 standard
0.591635 standard
0.663521 standard
0.632732 standard
0.470113 standard
0.365115 standard
0.367392 standard
0.058035 standard
0.05903 standard
0.0353112 standard
0.0614338 standard
0.0937513 standard
0.68519 standard
0.708259 standard
1.00002 standard
0.790176 standard
0.705136 standard
0.539034 standard
0.500667 standard
0.0775866 standard
0.03827 standard
0.580852 standard
0.6996 standard
0.692116 standard
0.569252 standard
0.0519881 standard
0.114777 standard
0.320445 standard
0.69905 standard
1.0 standard
0.673855 standard
0.350502 standard
0.0879946 standard
0.0859834 standard
0.058919 standard
0.0996871 standard
0.141486 standard
0.608745 standard
0.672412 standard
0.78738 standard
0.780718 standard
0.684875 standard
0.696617 standard
0.590256 standard
0.512507 standard
0.109225 standard
0.120109 standard
0.0739636 standard
0.612697 standard
0.706285 standard
0.703495 standard
0.612658 standard
0.0598469 standard
0.125197 standard
0.300821 standard
0.454056 standard
0.266646 standard
0.495384 standard
0.311968 standard
0.333488 standard
0.309482 standard
0.302073 standard
0.314816 standard
0.357589 standard
0.356234 standard
0.303811 standard
0.115034 standard
0.0788043 standard
0.095652 standard
0.0936064 standard
0.0667539 standard
0.114255 standard
0.14365 standard
0.128948 standard
0.492143 standard
1.00001 standard
0.869554 standard
0.437622 standard
0.122579 standard
0.133427 standard
0.0925905 standard
0.540376 standard
0.608407 standard
0.60833 standard
0.540498 standard
0.11786 standard
0.235548 standard
0.51699 standard
0.697757 standard
0.720637 standard
0.46602 standard
0.784478 standard
0.439215 standard
0.446232 standard
0.553317 standard
0.56123 standard
0.502427 standard
0.198339 standard
0.148738 standard
0.183483 standard
0.179946 standard
0.12979 standard
0.225397 standard
0.268387 standard
0.24301 standard
0.769387 standard
0.838613 standard
0.875165 standard
0.806503 standard
0.742416 standard
0.856193 standard
0.8096 standard
0.708076 standard
0.242496 standard
0.257784 standard
0.192611 standard
0.899024 standard
1.0001 standard
1.00016 standard
0.899018 standard
0.106208 standard
0.200194 standard
0.421766 standard
0.530287 standard
0.492136 standard
0.443073 standard
0.346299 standard
0.366011 standard
0.316294 standard
0.328926 standard
0.44478 standard
0.445818 standard
0.406843 standard
0.16533 standard
0.131886 standard
0.161474 standard
0.158485 standard
0.11576 standard
0.204095 standard
0.236444 standard
0.218667 standard
0.590376 standard
0.291191 standard
0.616424 standard
0.623454 standard
1.00015 standard
0.624618 standard
0.606093 standard
0.553268 standard
0.219816 standard
0.225201 standard
0.179919 standard
0.722679 standard
0.800498 standard
0.800544 standard
0.72271 standard
0.147257 standard
0.273387 standard
0.531561 standard
0.64287 standard
0.590751 standard
0.333296 standard
0.319103 standard
0.421475 standard
0.440384 standard
0.378443 standard
0.393805 standard
0.55796 standard
0.52305 standard
0.218113 standard
0.178438 standard
0.224978 standard
0.217683 standard
0.153839 standard
0.274514 standard
0.325164 standard
0.302836 standard
0.71321 standard
0.375556 standard
0.733794 standard
0.738962 standard
0.663735 standard
0.687691 standard
0.742623 standard
0.72467 standard
0.681796 standard
0.300981 standard
0.304761 standard
0.255963 standard
0.90749 standard
1.00083 standard
1.00096 standard
0.907524 standard
0.155338 standard
0.275949 standard
0.538149 standard
0.660013 standard
0.569768 standard
0.321173 standard
0.309175 standard
0.412661 standard
0.430392 standard
0.370543 standard
0.385113 standard
0.553859 standard
0.513818 standard
0.221852 standard
0.187076 standard
0.226492 standard
0.217691 standard
0.158509 standard
0.284202 standard
0.337453 standard
0.318649 standard
0.699662 standard
0.38269 standard
0.717015 standard
0.72072 standard
0.637281 standard
0.658703 standard
0.728804 standard
0.708202 standard
0.678008 standard
0.313561 standard
0.316543 standard
0.270024 standard
0.906787 standard
1.00066 standard
1.00097 standard
0.907327 standard
0.160134 standard
0.286223 standard
0.548576 standard
0.652889 standard
0.538682 standard
0.310229 standard
0.304228 standard
0.410414 standard
0.429179 standard
0.365676 standard
0.380294 standard
0.574339 standard
0.51302 standard
0.228945 standard
0.193901 standard
0.234677 standard
0.225227 standard
0.164025 standard
0.295848 standard
0.344938 standard
0.327358 standard
0.686 standard
0.394467 standard
0.717674 standard
0.710408 standard
0.625655 standard
0.635049 standard
0.711192 standard
0.689838 standard
0.442554 standard
0.674566 standard
0.322375 standard
0.32293 standard
0.2842 standard
0.911152 standard
1.00081 standard
1.00084 standard
0.911178 standard
0.167057 standard
0.29825 standard
0.558701 standard
0.639783 standard
0.51524 standard
0.299949 standard
0.2956 standard
0.405201 standard
0.42173 standard
0.361302 standard
0.373255 standard
0.572128 standard
0.521237 standard
0.234126 standard
0.201008 standard
0.25188 standard
0.245155 standard
0.170976 standard
0.310903 standard
0.359188 standard
0.346053 standard
0.668799 standard
0.412263 standard
0.703103 standard
0.700719 standard
0.604307 standard
0.613064 standard
0.685563 standard
0.666408 standard
0.443375 standard
0.676509 standard
0.340037 standard
0.347809 standard
0.300665 standard
0.909993 standard
1.00055 standard
1.00086 standard
0.910598 standard
0.169841 standard
0.295602 standard
0.554019 standard
0.650953 standard
0.524262 standard
0.29666 standard
0.297519 standard
0.41124 standard
0.423539 standard
0.357614 standard
0.369099 standard
0.575674 standard
0.527618 standard
0.234972 standard
0.20506 standard
0.251441 standard
0.243768 standard
0.174405 standard
0.31813 standard
0.366112 standard
0.353128 standard
0.663896 standard
0.414219 standard
0.688352 standard
0.685464 standard
0.607189 standard
0.605662 standard
0.676963 standard
0.659558 standard
0.451174 standard
0.67259 standard
0.351102 standard
0.356872 standard
0.307239 standard
0.911919 standard
1.00079 standard
1.00082 standard
0.911828 standard
0.172779 standard
0.310503 standard
0.564926 standard
0.634024 standard
0.507236 standard
0.292611 standard
0.294456 standard
0.399064 standard
0.411922 standard
0.353572 standard
0.36555 standard
0.583149 standard
0.536293 standard
0.238412 standard
0.208157 standard
0.257511 standard
0.248553 standard
0.173607 standard
0.31743 standard
0.37259 standard
0.360636 standard
0.658692 standard
0.420848 standard
0.681062 standard
0.677716 standard
0.599928 standard
0.59731 standard
0.670488 standard
0.664144 standard
0.479811 standard
0.677962 standard
0.356037 standard
0.3607 standard
0.314262 standard
0.91263 standard
1.00081 standard
1.0008 standard
0.912589 standard
0.1777 standard
0.313084 standard
0.553522 standard
0.639432 standard
0.503637 standard
0.287029 standard
0.288551 standard
0.408026 standard
0.418692 standard
0.34216 standard
0.354545 standard
0.576211 standard
0.515528 standard
0.236345 standard
0.213771 standard
0.251699 standard
0.243734 standard
0.178486 standard
0.328236 standard
0.376951 standard
0.373934 standard
0.635298 standard
0.422636 standard
0.650402 standard
0.659912 standard
0.586519 standard
0.584644 standard
0.656988 standard
0.650747 standard
0.463153 standard
0.657602 standard
0.36994 standard
0.373138 standard
0.325972 standard
0.911325 standard
1.00055 standard
1.00083 standard
0.912136 standard
0.185273 standard
0.321336 standard
0.565197 standard
0.619608 standard
0.480451 standard
0.278119 standard
0.280421 standard
0.386939 standard
0.396203 standard
0.32947 standard
0.344946 standard
0.591488 standard
0.527084 standard
0.245582 standard
0.221995 standard
0.265736 standard
0.259137 standard
0.186657 standard
0.346132 standard
0.393644 standard
0.392235 standard
0.623196 standard
0.443225 standard
0.632501 standard
0.63584 standard
0.566606 standard
0.565186 standard
0.629119 standard
0.62568 standard
0.497514 standard
0.653944 standard
0.392182 standard
0.393799 standard
0.344307 standard
0.911107 standard
1.00087 standard
1.00079 standard
0.91111 standard
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