Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Glutaric-acid

Simulation outputs:

InChI=1S/C5H8O4/c6-4(7)2-1-3-5(8)9/h1-3H2,(H,6,7)(H,8,9) Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.01386
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H8O4/c6-4(7)2-1-3-5(8)9/h1-3H2,(H,6,7)(H,8,9)
pKa 4.32@18C
pKa 5.42@25C
Note 1 None

Sample description:

Compound Type Concentration
Glutaric acid Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

10 11 12 13 14 15
10 1.784 -12.0 7.739 7.739 7.739 7.739
11 0 1.773 7.739 7.739 7.739 7.739
12 0 0 2.173 -12.4 0 0
13 0 0 0 2.173 0 0
14 0 0 0 0 2.167 -12.825
15 0 0 0 0 0 2.18

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

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PPM Amplitude Peak Type
0.00327006 standard
0.0113453 standard
0.0463617 standard
0.0496851 standard
0.0304961 standard
0.185484 standard
0.188991 standard
0.316061 standard
0.315353 standard
0.258521 standard
0.0332794 standard
0.0867882 standard
0.0146054 standard
0.00456667 standard
0.0158589 standard
0.0420416 standard
0.568926 standard
1.00029 standard
0.452417 standard
0.0377862 standard
0.0136014 standard
0.0116061 standard
0.0210241 standard
0.058099 standard
0.0897891 standard
0.265576 standard
0.463438 standard
0.865317 standard
1.0 standard
0.176415 standard
0.0811691 standard
0.0644301 standard
0.0253181 standard
0.0168071 standard
0.0336363 standard
0.0997044 standard
0.095934 standard
0.147615 standard
0.245941 standard
0.319188 standard
0.331977 standard
0.167316 standard
0.206318 standard
0.620075 standard
0.700139 standard
1.0 standard
0.176215 standard
0.188543 standard
0.0451274 standard
0.022329 standard
0.0310862 standard
0.034663 standard
0.120276 standard
0.1327 standard
0.179232 standard
0.286455 standard
0.297448 standard
0.305947 standard
0.131046 standard
0.154808 standard
0.666423 standard
1.0 standard
0.239729 standard
0.0703851 standard
0.0245121 standard
0.031908 standard
0.0382655 standard
0.129839 standard
0.128875 standard
0.197117 standard
0.275172 standard
0.298407 standard
0.120471 standard
0.138413 standard
0.65153 standard
1.00001 standard
0.167365 standard
0.254249 standard
0.083323 standard
0.0263522 standard
0.0328196 standard
0.042189 standard
0.137814 standard
0.130359 standard
0.277712 standard
0.293347 standard
0.112369 standard
0.125905 standard
0.639762 standard
1.0 standard
0.26942 standard
0.0357072 standard
0.0382345 standard
0.174064 standard
0.325867 standard
0.277903 standard
0.0830026 standard
0.0834346 standard
0.582054 standard
1.00001 standard
0.354623 standard
0.0394102 standard
0.041054 standard
0.185624 standard
0.335817 standard
0.276512 standard
0.0900685 standard
0.571108 standard
1.0 standard
0.395367 standard
0.0427024 standard
0.0446823 standard
0.187905 standard
0.33854 standard
0.28115 standard
0.024648 standard
0.0941259 standard
0.0111612 standard
0.00361016 standard
0.0105931 standard
0.576618 standard
1.00024 standard
0.426714 standard
0.030569 standard
0.00964365 standard
0.00326905 standard
0.0113328 standard
0.0460367 standard
0.0495396 standard
0.0307387 standard
0.184921 standard
0.188414 standard
0.316043 standard
0.315324 standard
0.258588 standard
0.0333272 standard
0.0867723 standard
0.0146637 standard
0.00456667 standard
0.0158605 standard
0.0420214 standard
0.568201 standard
1.00029 standard
0.451499 standard
0.0378037 standard
0.0136163 standard
0.00433815 standard
0.0154929 standard
0.049741 standard
0.0564268 standard
0.191177 standard
0.197717 standard
0.307703 standard
0.308446 standard
0.234726 standard
0.233356 standard
0.044186 standard
0.0760119 standard
0.0731372 standard
0.0193276 standard
0.00582419 standard
0.0214155 standard
0.0515044 standard
0.559175 standard
1.00054 standard
0.475419 standard
0.0472538 standard
0.0187259 standard
0.00556179 standard
0.02055 standard
0.0525087 standard
0.0674019 standard
0.1992 standard
0.21313 standard
0.312921 standard
0.313743 standard
0.233599 standard
0.225349 standard
0.0776453 standard
0.0678618 standard
0.0245219 standard
0.0071869 standard
0.0274723 standard
0.062581 standard
0.552819 standard
1.00072 standard
0.492496 standard
0.266588 standard
0.0575424 standard
0.0245743 standard
0.00622769 standard
0.0231164 standard
0.0537428 standard
0.0774649 standard
0.20373 standard
0.222107 standard
0.318887 standard
0.319223 standard
0.236319 standard
0.225777 standard
0.0830477 standard
0.0676787 standard
0.0269377 standard
0.00794183 standard
0.029793 standard
0.0677582 standard
0.55249 standard
0.327593 standard
1.00101 standard
0.549253 standard
0.504378 standard
0.259391 standard
0.0629868 standard
0.0275927 standard
0.0068716 standard
0.0254854 standard
0.0547776 standard
0.0877488 standard
0.205332 standard
0.231622 standard
0.321623 standard
0.321455 standard
0.241682 standard
0.226109 standard
0.0938303 standard
0.0669774 standard
0.0291211 standard
0.0086277 standard
0.0326398 standard
0.0732245 standard
0.55257 standard
0.315651 standard
1.00139 standard
0.53285 standard
0.516288 standard
0.254313 standard
0.0682783 standard
0.0304372 standard
0.00808848 standard
0.0306056 standard
0.0560119 standard
0.0967715 standard
0.207559 standard
0.245465 standard
0.324457 standard
0.327086 standard
0.24976 standard
0.223625 standard
0.110289 standard
0.0658926 standard
0.0337183 standard
0.00992646 standard
0.0379367 standard
0.0831826 standard
0.306765 standard
0.552931 standard
0.313108 standard
0.577946 standard
1.00093 standard
0.509158 standard
0.327833 standard
0.528313 standard
0.246078 standard
0.0791265 standard
0.0356346 standard
0.00959711 standard
0.033303 standard
0.0564879 standard
0.0961904 standard
0.212574 standard
0.247307 standard
0.32552 standard
0.332624 standard
0.246004 standard
0.220958 standard
0.107771 standard
0.0656272 standard
0.0356553 standard
0.0105694 standard
0.040547 standard
0.0870744 standard
0.290459 standard
0.553866 standard
0.320531 standard
0.561765 standard
1.00136 standard
0.506252 standard
0.33305 standard
0.533167 standard
0.242012 standard
0.0836814 standard
0.0390592 standard
0.00987522 standard
0.0357525 standard
0.0570005 standard
0.09198 standard
0.214231 standard
0.244768 standard
0.324042 standard
0.336398 standard
0.243181 standard
0.220818 standard
0.0993991 standard
0.065401 standard
0.0382498 standard
0.0113062 standard
0.0424468 standard
0.0919141 standard
0.279066 standard
0.559465 standard
0.339702 standard
0.552124 standard
1.00185 standard
0.510344 standard
0.351145 standard
0.532943 standard
0.241367 standard
0.0880339 standard
0.0414933 standard
0.0109791 standard
0.0399648 standard
0.0570012 standard
0.0776791 standard
0.0921177 standard
0.214224 standard
0.248299 standard
0.326135 standard
0.33727 standard
0.246655 standard
0.219078 standard
0.0892288 standard
0.0815247 standard
0.0644078 standard
0.0423547 standard
0.0115773 standard
0.0461332 standard
0.0998622 standard
0.258291 standard
0.555652 standard
0.572952 standard
1.00022 standard
0.55741 standard
0.524404 standard
0.232681 standard
0.0970344 standard
0.0466826 standard
0.012953 standard
0.0477304 standard
0.059371 standard
0.0820181 standard
0.23451 standard
0.0843842 standard
0.421395 standard
0.0765988 standard
0.403906 standard
0.0845422 standard
0.22809 standard
0.0831335 standard
0.0599869 standard
0.049297 standard
0.013417 standard
0.0539985 standard
0.112871 standard
0.231356 standard
0.532851 standard
0.535801 standard
1.00003 standard
0.528125 standard
0.533387 standard
0.220386 standard
0.111628 standard
0.054355 standard
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