Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Cis-3-hexen-1-ol

Simulation outputs:

InChI=1S/C6H12O/c1-2-3-4-5-6-7/h3-4,7H,2,5-6H2,1H3/b4-3- Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.01816
Temperature 298 K
pH 7.4
InChI InChI=1S/C6H12O/c1-2-3-4-5-6-7/h3-4,7H,2,5-6H2,1H3/b4-3-
Note 1 coupling to 13,14 approx
Note 2 1H decouple 11,12 and 15,16

Sample description:

Compound Type Concentration
cis-3-hexen-1-ol Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

8 9 10 11 12 13 14 15 16 17 18
8 0.935 -12.5 -12.5 7.569 7.569 0 0 0 0 0 0
9 0 0.935 -12.5 7.569 7.569 0 0 0 0 0 0
10 0 0 0.935 7.569 7.569 0 0 0 0 0 0
11 0 0 0 2.051 -14.245 8.855 0 0 0 0 0
12 0 0 0 0 2.065 5.629 0 0 0 0 0
13 0 0 0 0 0 5.387 10.764 0 0 0 0
14 0 0 0 0 0 0 5.59 5.629 8.855 0 0
15 0 0 0 0 0 0 0 2.307 -14.013 6.536 6.536
16 0 0 0 0 0 0 0 0 2.292 6.536 6.536
17 0 0 0 0 0 0 0 0 0 3.6 -12.4
18 0 0 0 0 0 0 0 0 0 0 3.6

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.510584 standard
1.0 standard
0.510584 standard
0.00503073 standard
0.0152459 standard
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0.213543 standard
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0.154887 standard
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1.0 standard
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1.0 standard
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