Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Valeric-acid

Simulation outputs:

InChI=1S/C5H10O2/c1-2-3-4-5(6)7/h2-4H2,1H3,(H,6,7) Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.00366
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H10O2/c1-2-3-4-5(6)7/h2-4H2,1H3,(H,6,7)
Note 1 None

Sample description:

Compound Type Concentration
Valeric acid Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

8 9 10 11 12 13 14 15 16
8 0.876 -12.5 -12.5 7.409 7.409 0 0 0 0
9 0 0.876 -12.5 7.409 7.409 0 0 0 0
10 0 0 0.876 7.409 7.409 0 0 0 0
11 0 0 0 1.288 -12.4 9.371 4.815 0 0
12 0 0 0 0 1.288 7.154 8.967 0 0
13 0 0 0 0 0 1.513 -12.4 8.351 10.21
14 0 0 0 0 0 0 1.513 3.713 7.529
15 0 0 0 0 0 0 0 2.167 -12.4
16 0 0 0 0 0 0 0 0 2.167

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

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PPM Amplitude Peak Type
0.469076 standard
1.00017 standard
0.530002 standard
0.0469473 standard
0.168551 standard
0.292402 standard
0.298853 standard
0.179651 standard
0.0497173 standard
0.00398528 standard
0.085916 standard
0.245356 standard
0.343695 standard
0.218906 standard
0.0571935 standard
0.0557814 standard
0.00302075 standard
0.345911 standard
0.585902 standard
0.310313 standard
0.0285811 standard
0.0525851 standard
1.0 standard
0.678079 standard
0.38779 standard
0.547003 standard
0.452475 standard
0.457122 standard
0.465409 standard
0.463564 standard
0.288209 standard
0.311233 standard
0.106639 standard
0.373813 standard
0.480737 standard
0.154422 standard
0.0841342 standard
0.222215 standard
1.0 standard
0.623329 standard
0.260716 standard
0.296998 standard
0.333733 standard
0.386006 standard
0.517716 standard
0.465945 standard
0.209726 standard
0.21241 standard
0.095379 standard
0.0548433 standard
0.0279701 standard
0.437817 standard
0.592131 standard
0.186035 standard
0.148778 standard
0.252667 standard
1.0 standard
0.638054 standard
0.106587 standard
0.237106 standard
0.274796 standard
0.253054 standard
0.364624 standard
0.327402 standard
0.409885 standard
0.432479 standard
0.319587 standard
0.341199 standard
0.186906 standard
0.202912 standard
0.0821554 standard
0.0107151 standard
0.010717 standard
0.483532 standard
0.629892 standard
0.218964 standard
0.273117 standard
0.260585 standard
1.00001 standard
0.66189 standard
0.0979404 standard
0.228203 standard
0.271584 standard
0.242468 standard
0.307663 standard
0.287307 standard
0.284921 standard
0.347583 standard
0.33648 standard
0.397144 standard
0.341042 standard
0.190979 standard
0.203737 standard
0.0799462 standard
0.0526251 standard
0.00754512 standard
0.00630112 standard
0.00635212 standard
0.502523 standard
0.654268 standard
0.239787 standard
0.292315 standard
0.269923 standard
1.0 standard
0.665993 standard
0.0869241 standard
0.221199 standard
0.266581 standard
0.234006 standard
0.2546 standard
0.296662 standard
0.341187 standard
0.375442 standard
0.347601 standard
0.185517 standard
0.203077 standard
0.0768728 standard
0.0537504 standard
0.00666813 standard
0.00452313 standard
0.508331 standard
0.664915 standard
0.244041 standard
0.382405 standard
1.00006 standard
0.576072 standard
0.0560332 standard
0.16663 standard
0.265032 standard
0.267101 standard
0.183237 standard
0.064454 standard
0.110845 standard
0.268017 standard
0.317984 standard
0.19399 standard
0.0574192 standard
0.052004 standard
0.00372612 standard
0.417183 standard
0.657149 standard
0.281646 standard
0.429044 standard
1.00007 standard
0.547512 standard
0.0496475 standard
0.16295 standard
0.276796 standard
0.278787 standard
0.178303 standard
0.0545345 standard
0.00487812 standard
0.098901 standard
0.249428 standard
0.327806 standard
0.202435 standard
0.056027 standard
0.0534004 standard
0.00335104 standard
0.375301 standard
0.612518 standard
0.297711 standard
0.452679 standard
1.00019 standard
0.536492 standard
0.0477248 standard
0.16613 standard
0.285664 standard
0.289754 standard
0.178543 standard
0.0512446 standard
0.00417756 standard
0.0904768 standard
0.246609 standard
0.337396 standard
0.212185 standard
0.0566374 standard
0.0548441 standard
0.00321703 standard
0.356113 standard
0.594601 standard
0.30605 standard
0.469113 standard
1.00017 standard
0.529656 standard
0.0469606 standard
0.168474 standard
0.292083 standard
0.298491 standard
0.179712 standard
0.0496827 standard
0.00385492 standard
0.0862472 standard
0.245115 standard
0.344074 standard
0.219047 standard
0.0572633 standard
0.0560643 standard
0.00301116 standard
0.345888 standard
0.58585 standard
0.310187 standard
0.480834 standard
1.00071 standard
0.523668 standard
0.0465321 standard
0.170119 standard
0.29665 standard
0.303596 standard
0.180869 standard
0.0491581 standard
0.0037295 standard
0.083662 standard
0.244551 standard
0.348866 standard
0.223982 standard
0.0584441 standard
0.057107 standard
0.002707 standard
0.340165 standard
0.580868 standard
0.315019 standard
0.489712 standard
1.0 standard
0.520607 standard
0.0460965 standard
0.170597 standard
0.301913 standard
0.308378 standard
0.182329 standard
0.0490903 standard
0.00361729 standard
0.0804723 standard
0.243577 standard
0.351724 standard
0.227427 standard
0.0595117 standard
0.0583326 standard
0.00240133 standard
0.336289 standard
0.576636 standard
0.314641 standard
0.491667 standard
1.00024 standard
0.516056 standard
0.045535 standard
0.170468 standard
0.301491 standard
0.306998 standard
0.182985 standard
0.0487331 standard
0.0035814 standard
0.0789422 standard
0.242587 standard
0.352355 standard
0.229346 standard
0.0596295 standard
0.0583171 standard
0.00299167 standard
0.334912 standard
0.574969 standard
0.317754 standard
0.495925 standard
1.0011 standard
0.516063 standard
0.0456845 standard
0.171298 standard
0.303247 standard
0.311344 standard
0.182279 standard
0.0489014 standard
0.00354933 standard
0.0791322 standard
0.243017 standard
0.351524 standard
0.229598 standard
0.0611591 standard
0.00281212 standard
0.332887 standard
0.577022 standard
0.315679 standard
0.499803 standard
1.00116 standard
0.512004 standard
0.0453069 standard
0.171649 standard
0.305457 standard
0.310168 standard
0.181769 standard
0.0489476 standard
0.00335689 standard
0.0777247 standard
0.241989 standard
0.356077 standard
0.232425 standard
0.0606316 standard
0.0594344 standard
0.00298184 standard
0.329608 standard
0.575965 standard
0.317009 standard
0.499029 standard
1.00141 standard
0.509861 standard
0.0447639 standard
0.172488 standard
0.307601 standard
0.311398 standard
0.182755 standard
0.0487816 standard
0.00335975 standard
0.077443 standard
0.239908 standard
0.356201 standard
0.233771 standard
0.0614856 standard
0.00306877 standard
0.333228 standard
0.574774 standard
0.322265 standard
0.500613 standard
1.00162 standard
0.508873 standard
0.0449453 standard
0.173546 standard
0.306834 standard
0.31265 standard
0.18235 standard
0.0490516 standard
0.00327688 standard
0.0777737 standard
0.237634 standard
0.359133 standard
0.233513 standard
0.0617996 standard
0.00306313 standard
0.333135 standard
0.573997 standard
0.321452 standard
0.50523 standard
1.00154 standard
0.50997 standard
0.0447354 standard
0.173411 standard
0.309115 standard
0.31102 standard
0.181471 standard
0.0486817 standard
0.00329242 standard
0.0779073 standard
0.236214 standard
0.355532 standard
0.2365 standard
0.063153 standard
0.00291439 standard
0.327922 standard
0.57644 standard
0.318211 standard
0.505978 standard
1.0 standard
0.507537 standard
0.0446928 standard
0.174994 standard
0.31043 standard
0.311806 standard
0.180827 standard
0.0484255 standard
0.00323929 standard
0.0726296 standard
0.233784 standard
0.35432 standard
0.238175 standard
0.0621759 standard
0.00307036 standard
0.328453 standard
0.573199 standard
0.320542 standard
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