Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

BMRB entry

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pKa (R. Williams)

1H NMR (Hans J. Reich)

3-Ureidopropionic acid

Simulation outputs:

InChI=1S/C4H8N2O3/c5-4(9)6-2-1-3(7)8/h1-2H2,(H,7,8)(H3,5,6,9) Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.00478
Temperature 298 K
pH 7.4
InChI InChI=1S/C4H8N2O3/c5-4(9)6-2-1-3(7)8/h1-2H2,(H,7,8)(H3,5,6,9)
Note 1 Oscar Li

Sample description:

Compound Type Concentration
3-Ureidopropionic acid Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

10 11 12 13
10 2.36 -12.4 6.686 6.686
11 0 2.36 6.686 6.686
12 0 0 3.291 -12.4
13 0 0 0 3.291

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.513333 standard
1.0 standard
0.527589 standard
0.52709 standard
0.999764 standard
0.513302 standard
0.380576 standard
1.0 standard
0.796209 standard
0.796158 standard
0.999962 standard
0.380571 standard
0.422552 standard
0.999222 standard
0.677313 standard
0.67726 standard
1.0 standard
0.422597 standard
0.444582 standard
1.0 standard
0.627396 standard
0.628132 standard
0.999973 standard
0.444579 standard
0.451659 standard
1.0 standard
0.612877 standard
0.612785 standard
0.999966 standard
0.452344 standard
0.458104 standard
0.998556 standard
0.600858 standard
0.601634 standard
1.00001 standard
0.458152 standard
0.487145 standard
0.999393 standard
0.557041 standard
0.556892 standard
1.0 standard
0.487897 standard
0.497794 standard
0.999312 standard
0.544681 standard
0.543807 standard
1.00004 standard
0.498589 standard
0.511877 standard
0.999407 standard
0.529298 standard
0.529004 standard
1.00024 standard
0.51111 standard
0.513323 standard
1.0 standard
0.527574 standard
0.527076 standard
0.999764 standard
0.513292 standard
0.520483 standard
0.99874 standard
0.520482 standard
0.520774 standard
1.00055 standard
0.519661 standard
0.520338 standard
0.999128 standard
0.520667 standard
0.520866 standard
1.00075 standard
0.520867 standard
0.520614 standard
1.00086 standard
0.521403 standard
0.520591 standard
1.00068 standard
0.520591 standard
0.520227 standard
1.00079 standard
0.520964 standard
0.521117 standard
1.00097 standard
0.520989 standard
0.520834 standard
1.00123 standard
0.52189 standard
0.520833 standard
1.00123 standard
0.52189 standard
0.5209 standard
1.00136 standard
0.522053 standard
0.5209 standard
1.00136 standard
0.522054 standard
0.520128 standard
0.998431 standard
0.519812 standard
0.520591 standard
1.0 standard
0.51934 standard
0.520036 standard
0.998096 standard
0.519597 standard
0.520541 standard
1.0 standard
0.51908 standard
0.518872 standard
0.997632 standard
0.520813 standard
0.520158 standard
1.0 standard
0.520158 standard
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