Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

1H NMR (Hans J. Reich)

Thiamin

Simulation outputs:

InChI=1S/C12H17N4OS/c1-8-11(3-4-17)18-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7,17H,3-4,6H2,1-2H3,(H2,13,14,15)/q+1 Parameter Value
Field strength 400.13(MHz)
RMSD of the fit 0.07637
Temperature 298 K
pH 7.4
InChI InChI=1S/C12H17N4OS/c1-8-11(3-4-17)18-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7,17H,3-4,6H2,1-2H3,(H2,13,14,15)/q+1
Note 1 Done but missing peak 32?
Note 2 22,23,24?19,20,21
Note 3 25,26?27,28

Sample description:

Compound Type Concentration
Thiamin Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
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Spin System Matrix

19 20 21 32 30 31 29 22 23 24 25 26 27 28
19 2.578 -14.9 -14.9 0 0 0 0 0 0 0 0 0 0 0
20 0 2.578 -14.9 0 0 0 0 0 0 0 0 0 0 0
21 0 0 2.578 0 0 0 0 0 0 0 0 0 0 0
32 0 0 0 6.0 0 0 0 0 0 0 0 0 0 0
30 0 0 0 0 5.458 -12.4 0 0 0 0 0 0 0 0
31 0 0 0 0 0 5.458 0 0 0 0 0 0 0 0
29 0 0 0 0 0 0 8.066 0 0 0 0 0 0 0
22 0 0 0 0 0 0 0 2.49 -14.9 -14.9 0 0 0 0
23 0 0 0 0 0 0 0 0 2.49 -14.9 0 0 0 0
24 0 0 0 0 0 0 0 0 0 2.49 0 0 0 0
25 0 0 0 0 0 0 0 0 0 0 3.194 -12.4 5.682 5.682
26 0 0 0 0 0 0 0 0 0 0 0 3.194 5.682 5.682
27 0 0 0 0 0 0 0 0 0 0 0 0 3.89 -12.4
28 0 0 0 0 0 0 0 0 0 0 0 0 0 3.89

Spectra

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PPM Amplitude Peak Type
0.999891 standard
1.0 standard
0.141676 standard
0.272784 standard
0.14966 standard
0.14964 standard
0.272762 standard
0.141654 standard
0.666203 standard
0.331244 standard
0.331529 standard
0.999392 standard
1.0 standard
0.0844971 standard
0.210721 standard
0.176919 standard
0.175998 standard
0.208531 standard
0.0807261 standard
0.619793 standard
0.309948 standard
0.308452 standard
0.999589 standard
1.0 standard
0.103003 standard
0.239374 standard
0.169453 standard
0.168846 standard
0.238262 standard
0.101463 standard
0.644002 standard
0.320798 standard
0.320484 standard
0.999772 standard
1.00001 standard
0.114069 standard
0.253884 standard
0.165084 standard
0.164731 standard
0.253262 standard
0.1132 standard
0.653651 standard
0.325514 standard
0.325045 standard
0.999904 standard
1.0 standard
0.117838 standard
0.258104 standard
0.163365 standard
0.163248 standard
0.257478 standard
0.117131 standard
0.656038 standard
0.326446 standard
0.326269 standard
0.999575 standard
1.0 standard
0.12069 standard
0.26104 standard
0.162112 standard
0.161893 standard
0.260709 standard
0.120213 standard
0.658013 standard
0.327608 standard
0.327154 standard
0.999872 standard
1.0 standard
0.133768 standard
0.271577 standard
0.154848 standard
0.154583 standard
0.271152 standard
0.13372 standard
0.664424 standard
0.330815 standard
0.330473 standard
1.0 standard
0.999862 standard
0.137904 standard
0.273407 standard
0.151918 standard
0.151988 standard
0.273229 standard
0.137905 standard
0.665703 standard
0.331438 standard
0.331595 standard
0.9997 standard
1.0 standard
0.141665 standard
0.272722 standard
0.149733 standard
0.149631 standard
0.272703 standard
0.141712 standard
0.665807 standard
0.331435 standard
0.331621 standard
0.999564 standard
1.0 standard
0.143111 standard
0.274328 standard
0.147117 standard
0.147315 standard
0.274318 standard
0.142886 standard
0.666209 standard
0.331656 standard
0.331532 standard
0.999759 standard
1.0 standard
0.144993 standard
0.274569 standard
0.144992 standard
0.1452 standard
0.274126 standard
0.1452 standard
0.666038 standard
0.331407 standard
0.331547 standard
0.999876 standard
1.0 standard
0.145118 standard
0.274452 standard
0.145118 standard
0.145367 standard
0.274517 standard
0.145121 standard
0.665906 standard
0.331299 standard
0.33123 standard
0.99987 standard
1.0 standard
0.145322 standard
0.27453 standard
0.145008 standard
0.145316 standard
0.274524 standard
0.145002 standard
0.66644 standard
0.33148 standard
0.331615 standard
0.999883 standard
1.0 standard
0.145314 standard
0.27464 standard
0.145148 standard
0.145343 standard
0.274482 standard
0.145047 standard
0.665967 standard
0.331649 standard
0.331865 standard
0.999881 standard
1.0 standard
0.145224 standard
0.274873 standard
0.145222 standard
0.145371 standard
0.274447 standard
0.14502 standard
0.666266 standard
0.331863 standard
0.331479 standard
1.0 standard
0.999763 standard
0.145025 standard
0.274693 standard
0.145025 standard
0.145237 standard
0.274421 standard
0.145219 standard
0.666384 standard
0.331313 standard
0.331451 standard
0.999868 standard
1.0 standard
0.145023 standard
0.274734 standard
0.145023 standard
0.145247 standard
0.274428 standard
0.145237 standard
0.666719 standard
0.331514 standard
0.331437 standard
0.999632 standard
1.0 standard
0.145506 standard
0.274538 standard
0.145506 standard
0.145261 standard
0.274047 standard
0.145262 standard
0.666436 standard
0.331425 standard
0.331854 standard
0.999533 standard
1.0 standard
0.145688 standard
0.27428 standard
0.145688 standard
0.145345 standard
0.273594 standard
0.145348 standard
0.666523 standard
0.331975 standard
0.331964 standard
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