Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Methyl-4-aminobutyrate

Simulation outputs:

InChI=1S/C5H11NO2/c1-8-5(7)3-2-4-6/h2-4,6H2,1H3 Parameter Value
Field strength 400.13(MHz)
RMSD of the fit 0.01294
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H11NO2/c1-8-5(7)3-2-4-6/h2-4,6H2,1H3
Note 1 12-17 assigned using qm

Sample description:

Compound Type Concentration
GABA methyl ester Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

9 10 11 14 15 12 13 16 17
9 3.705 -11.5 -11.5 0 0 0 0 0 0
10 0 3.705 -11.5 0 0 0 0 0 0
11 0 0 3.705 0 0 0 0 0 0
14 0 0 0 2.526 -12.4 4.937 6.771 0 0
15 0 0 0 0 2.526 8.797 8.902 0 0
12 0 0 0 0 0 1.963 -12.4 7.239 13.068
13 0 0 0 0 0 0 1.963 4.966 5.467
16 0 0 0 0 0 0 0 3.035 -12.4
17 0 0 0 0 0 0 0 0 3.035

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

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PPM Amplitude Peak Type
0.00140412 standard
0.00455925 standard
0.0331576 standard
0.110029 standard
0.159623 standard
0.122697 standard
0.0478723 standard
0.0051865 standard
0.00167704 standard
0.003345 standard
0.17709 standard
0.310499 standard
0.143792 standard
0.002294 standard
0.00331503 standard
0.167296 standard
0.198632 standard
0.151501 standard
0.00302537 standard
1.0 standard
0.0108181 standard
0.0162981 standard
0.0383981 standard
0.0433331 standard
0.045143 standard
0.094806 standard
0.105789 standard
0.115517 standard
0.103717 standard
0.206845 standard
0.198397 standard
0.0742861 standard
0.0574 standard
0.168754 standard
0.19259 standard
0.079472 standard
0.0638541 standard
1.0 standard
0.0142271 standard
0.01856 standard
0.0576221 standard
0.0554871 standard
0.0504271 standard
0.11783 standard
0.119954 standard
0.0618263 standard
0.0623023 standard
0.213809 standard
0.227583 standard
0.0749675 standard
0.0629794 standard
0.187728 standard
0.205023 standard
0.092427 standard
0.0857391 standard
1.0 standard
0.016858 standard
0.0205274 standard
0.0707745 standard
0.135712 standard
0.126147 standard
0.0595682 standard
0.00841612 standard
0.00662712 standard
0.206331 standard
0.252391 standard
0.0830971 standard
0.0751953 standard
0.00565112 standard
0.190384 standard
0.213003 standard
0.103003 standard
1.0 standard
0.017936 standard
0.0211984 standard
0.075881 standard
0.141616 standard
0.128096 standard
0.0585375 standard
0.00777013 standard
0.00383013 standard
0.00556912 standard
0.204156 standard
0.261569 standard
0.0872313 standard
0.080862 standard
0.00510013 standard
0.19032 standard
0.21339 standard
0.10806 standard
1.0 standard
0.0189854 standard
0.0220541 standard
0.080014 standard
0.146316 standard
0.12937 standard
0.0579942 standard
0.00728912 standard
0.00322612 standard
0.00503112 standard
0.20189 standard
0.270021 standard
0.0912793 standard
0.086176 standard
0.00460013 standard
0.188521 standard
0.213403 standard
0.112571 standard
1.0 standard
0.00132412 standard
0.00411112 standard
0.0257631 standard
0.0272338 standard
0.099836 standard
0.157485 standard
0.128355 standard
0.0536724 standard
0.00597225 standard
0.00195512 standard
0.00369012 standard
0.189617 standard
0.301113 standard
0.122497 standard
0.00357913 standard
0.177951 standard
0.203947 standard
0.137606 standard
0.002982 standard
1.0 standard
0.001342 standard
0.00441125 standard
0.0307604 standard
0.10645 standard
0.158765 standard
0.124621 standard
0.0498706 standard
0.00542338 standard
0.00180525 standard
0.003417 standard
0.181891 standard
0.307976 standard
0.136253 standard
0.00227313 standard
0.003405 standard
0.170683 standard
0.201129 standard
0.147008 standard
0.00300204 standard
1.0 standard
0.001406 standard
0.00457212 standard
0.032701 standard
0.110119 standard
0.159641 standard
0.122183 standard
0.0476145 standard
0.0051995 standard
0.00167904 standard
0.00334423 standard
0.177098 standard
0.31051 standard
0.143802 standard
0.002291 standard
0.00331703 standard
0.167061 standard
0.198534 standard
0.151512 standard
0.00302637 standard
1.0 standard
0.001457 standard
0.00469 standard
0.0344996 standard
0.112266 standard
0.159478 standard
0.120423 standard
0.0458506 standard
0.00503302 standard
0.001599 standard
0.00331188 standard
0.173387 standard
0.312348 standard
0.148827 standard
0.00275203 standard
0.00322516 standard
0.165928 standard
0.198297 standard
0.152766 standard
0.00307708 standard
1.0 standard
0.00147525 standard
0.00473833 standard
0.0364981 standard
0.113503 standard
0.160344 standard
0.118838 standard
0.0453004 standard
0.00497216 standard
0.00157863 standard
0.00318956 standard
0.171337 standard
0.312647 standard
0.150993 standard
0.00276816 standard
0.00320192 standard
0.163899 standard
0.196741 standard
0.156358 standard
0.00311012 standard
1.0 standard
0.00148563 standard
0.00475375 standard
0.037296 standard
0.115094 standard
0.158955 standard
0.118743 standard
0.0438535 standard
0.0049428 standard
0.00156063 standard
0.00311262 standard
0.16864 standard
0.313131 standard
0.154471 standard
0.0028552 standard
0.00313157 standard
0.163561 standard
0.197336 standard
0.156802 standard
0.00313832 standard
1.0 standard
0.00152316 standard
0.00479288 standard
0.0376739 standard
0.11524 standard
0.159506 standard
0.117683 standard
0.0438811 standard
0.0049245 standard
0.00155233 standard
0.00309821 standard
0.167967 standard
0.312631 standard
0.156557 standard
0.00288347 standard
0.00314241 standard
0.160962 standard
0.19635 standard
0.158332 standard
0.00314221 standard
1.0 standard
0.00150316 standard
0.00483368 standard
0.0381956 standard
0.115326 standard
0.159122 standard
0.119043 standard
0.042902 standard
0.00489389 standard
0.00155025 standard
0.00303913 standard
0.166606 standard
0.313698 standard
0.156352 standard
0.00297013 standard
0.00313928 standard
0.162489 standard
0.198137 standard
0.157057 standard
0.00314111 standard
1.0 standard
0.00150106 standard
0.00484421 standard
0.0381321 standard
0.115142 standard
0.159639 standard
0.117654 standard
0.0427009 standard
0.00489103 standard
0.00153216 standard
0.00296803 standard
0.165203 standard
0.31286 standard
0.157992 standard
0.002961 standard
0.00314002 standard
0.163852 standard
0.19687 standard
0.158339 standard
0.003133 standard
1.0 standard
0.00150701 standard
0.00487113 standard
0.0375869 standard
0.114289 standard
0.160386 standard
0.118227 standard
0.0424946 standard
0.00482862 standard
0.00152806 standard
0.00297101 standard
0.16653 standard
0.31305 standard
0.160609 standard
0.00296703 standard
0.00314001 standard
0.160738 standard
0.197455 standard
0.157308 standard
0.00314702 standard
1.0 standard
0.00150801 standard
0.00481401 standard
0.0394882 standard
0.116566 standard
0.160852 standard
0.117122 standard
0.0422428 standard
0.00482662 standard
0.00153101 standard
0.00297382 standard
0.165445 standard
0.31393 standard
0.160258 standard
0.00297405 standard
0.00312405 standard
0.160082 standard
0.19766 standard
0.160039 standard
0.00314512 standard
1.0 standard
0.00150301 standard
0.00480869 standard
0.0389011 standard
0.115615 standard
0.159928 standard
0.118059 standard
0.0427679 standard
0.00487961 standard
0.00152901 standard
0.00297823 standard
0.162716 standard
0.312548 standard
0.159157 standard
0.00296245 standard
0.00313535 standard
0.158668 standard
0.195931 standard
0.158583 standard
0.00312549 standard
1.0 standard
0.00150921 standard
0.00482523 standard
0.0388028 standard
0.116927 standard
0.16142 standard
0.117339 standard
0.0417791 standard
0.00485059 standard
0.00152821 standard
0.00294849 standard
0.164654 standard
0.314567 standard
0.160974 standard
0.00295059 standard
0.00312761 standard
0.160413 standard
0.194542 standard
0.155659 standard
0.00313171 standard
1.0 standard
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