Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

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Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Trimethyl phosphonoacetate

Simulation outputs:

InChI=1S/C5H11O5P/c1-8-5(6)4-11(7,9-2)10-3/h4H2,1-3H3 Parameter Value
Field strength 400.13(MHz)
RMSD of the fit 0.00812
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H11O5P/c1-8-5(6)4-11(7,9-2)10-3/h4H2,1-3H3
Note 1 Oscar Li

Sample description:

Compound Type Concentration
Trimethylacetyl phosphate Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

12 13 14 15 16 17 18 19 20 21 22
12 3.808 0 0 0 0 0 0 0 0 0 0
13 0 3.808 -12.4 0 0 0 0 0 0 0 0
14 0 0 3.808 0 0 0 0 0 0 0 0
15 0 0 0 3.837 0 0 0 0 0 0 0
16 0 0 0 0 3.837 -12.4 0 0 0 0 0
17 0 0 0 0 0 3.837 0 0 0 0 0
18 0 0 0 0 0 0 3.837 -12.4 0 0 0
19 0 0 0 0 0 0 0 3.837 0 0 0
20 0 0 0 0 0 0 0 0 3.837 0 0
21 0 0 0 0 0 0 0 0 0 3.769 -12.4
22 0 0 0 0 0 0 0 0 0 0 3.769

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

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PPM Amplitude Peak Type
0.339611 standard
0.505923 standard
1.0 standard
1.0 standard
0.407887 standard
1.0 standard
0.378559 standard
0.631902 standard
1.0 standard
0.370419 standard
0.607786 standard
1.00002 standard
0.364488 standard
0.589624 standard
1.00001 standard
0.34477 standard
0.524477 standard
1.00001 standard
0.340959 standard
0.510844 standard
1.0 standard
0.339612 standard
0.505927 standard
1.0 standard
0.338986 standard
0.503623 standard
1.0 standard
0.338646 standard
0.502364 standard
1.0 standard
0.33844 standard
0.501603 standard
1.0 standard
0.338367 standard
0.501331 standard
1.0 standard
0.338307 standard
0.501108 standard
1.0 standard
0.338215 standard
0.500768 standard
1.0 standard
0.33818 standard
0.500636 standard
1.0 standard
0.33815 standard
0.500524 standard
1.0 standard
0.338101 standard
0.500344 standard
1.0 standard
0.338036 standard
0.5001 standard
1.0 standard
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