Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download entry NMR-STAR

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External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

Pyridoxamine

Simulation outputs:

InChI=1S/C8H12N2O2/c1-5-8(12)7(2-9)6(4-11)3-10-5/h3,11-12H,2,4,9H2,1H3 Parameter Value
Field strength 400.13(MHz)
RMSD of the fit 0.00805
Temperature 298 K
pH 7.4
InChI InChI=1S/C8H12N2O2/c1-5-8(12)7(2-9)6(4-11)3-10-5/h3,11-12H,2,4,9H2,1H3
Note 1 None

Sample description:

Compound Type Concentration
Pyridoxamine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

13 14 15 18 19 20 16 17
13 2.46 -14.9 -14.9 0 0 0 0 0
14 0 2.46 -14.9 0 0 0 0 0
15 0 0 2.46 0 0 0 0 0
18 0 0 0 7.609 0 0 0 0
19 0 0 0 0 4.299 -12.4 0 0
20 0 0 0 0 0 4.299 0 0
16 0 0 0 0 0 0 4.702 -12.4
17 0 0 0 0 0 0 0 4.702

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

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PPM Amplitude Peak Type
1.0 standard
0.666675 standard
0.666995 standard
0.332874 standard
1.0 standard
0.672595 standard
0.672493 standard
0.333013 standard
1.0 standard
0.668946 standard
0.669054 standard
0.332955 standard
1.0 standard
0.667779 standard
0.667628 standard
0.333044 standard
1.0 standard
0.667617 standard
0.667522 standard
0.332954 standard
1.0 standard
0.667681 standard
0.667725 standard
0.332911 standard
1.0 standard
0.666785 standard
0.666806 standard
0.333211 standard
1.0 standard
0.666697 standard
0.666722 standard
0.333267 standard
1.0 standard
0.666678 standard
0.666364 standard
0.333283 standard
1.0 standard
0.666674 standard
0.666454 standard
0.332982 standard
1.0 standard
0.666274 standard
0.666375 standard
0.332779 standard
1.0 standard
0.666614 standard
0.666728 standard
0.333407 standard
1.0 standard
0.666755 standard
0.666646 standard
0.333251 standard
1.0 standard
0.666093 standard
0.666371 standard
0.332977 standard
1.0 standard
0.666331 standard
0.666162 standard
0.333036 standard
1.0 standard
0.667152 standard
0.666696 standard
0.333304 standard
1.0 standard
0.666879 standard
0.666895 standard
0.333198 standard
1.0 standard
0.6666 standard
0.666303 standard
0.33287 standard
1.0 standard
0.665943 standard
0.666038 standard
0.333122 standard
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