Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

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Download entry NMR-STAR

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External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-threonine

Simulation outputs:

InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)/t2-,3+/m1/s1 Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.01334
Temperature 298 K
pH 7.4
InChI InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)/t2-,3+/m1/s1
pKa 2.09
pKa 9.10
Note 1 None

Sample description:

Compound Type Concentration
L-Threonine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

9 10 11 12 13
9 1.312 -12.5 -12.5 6.64 0
10 0 1.312 -12.5 6.64 0
11 0 0 1.31 6.64 0
12 0 0 0 4.235 4.756
13 0 0 0 0 3.566

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
1.00031 standard
0.998256 standard
0.350325 standard
0.350325 standard
0.0494047 standard
0.146941 standard
0.168266 standard
0.168244 standard
0.147087 standard
0.0494203 standard
0.894707 standard
1.0 standard
0.275441 standard
0.383689 standard
0.068591 standard
0.158794 standard
0.141798 standard
0.159025 standard
0.108496 standard
0.0355123 standard
0.931288 standard
1.0 standard
0.296349 standard
0.368496 standard
0.0591961 standard
0.154418 standard
0.149131 standard
0.162245 standard
0.120103 standard
0.0389423 standard
0.950338 standard
1.00001 standard
0.307248 standard
0.361461 standard
0.055788 standard
0.152111 standard
0.152163 standard
0.163056 standard
0.126994 standard
0.040942 standard
0.957662 standard
1.00001 standard
0.311147 standard
0.359457 standard
0.0547872 standard
0.150553 standard
0.154019 standard
0.164646 standard
0.128945 standard
0.0416686 standard
0.964235 standard
1.00002 standard
0.314434 standard
0.358026 standard
0.054071 standard
0.149298 standard
0.154928 standard
0.165361 standard
0.131044 standard
0.0423221 standard
1.00001 standard
1.00002 standard
0.333129 standard
0.352581 standard
0.0499779 standard
0.147125 standard
0.161551 standard
0.16668 standard
0.140726 standard
0.0470412 standard
1.00002 standard
0.998923 standard
0.342607 standard
0.346326 standard
0.0496002 standard
0.144324 standard
0.165373 standard
0.165274 standard
0.144772 standard
0.047724 standard
1.00005 standard
0.998524 standard
0.347125 standard
0.347126 standard
0.0489618 standard
0.145525 standard
0.166376 standard
0.16654 standard
0.145721 standard
0.0489847 standard
1.00031 standard
0.998256 standard
0.350326 standard
0.350326 standard
0.0493997 standard
0.146901 standard
0.16866 standard
0.168772 standard
0.14687 standard
0.0493888 standard
1.00012 standard
0.999144 standard
0.354217 standard
0.354217 standard
0.0499413 standard
0.148562 standard
0.170668 standard
0.170574 standard
0.148642 standard
0.0499668 standard
1.00018 standard
0.997305 standard
0.357516 standard
0.357516 standard
0.0504598 standard
0.149751 standard
0.171819 standard
0.171849 standard
0.149629 standard
0.0504365 standard
0.999101 standard
1.00002 standard
0.360133 standard
0.360133 standard
0.0508355 standard
0.151445 standard
0.173669 standard
0.173669 standard
0.151445 standard
0.0508344 standard
1.00023 standard
0.997186 standard
0.360876 standard
0.360876 standard
0.0509436 standard
0.151625 standard
0.172596 standard
0.172637 standard
0.151405 standard
0.0508819 standard
0.998784 standard
1.00002 standard
0.365255 standard
0.365255 standard
0.0516042 standard
0.153043 standard
0.175824 standard
0.175913 standard
0.153688 standard
0.0514683 standard
0.998636 standard
1.00002 standard
0.367687 standard
0.367687 standard
0.0517335 standard
0.154381 standard
0.176471 standard
0.176335 standard
0.15409 standard
0.0519101 standard
1.00002 standard
1.00002 standard
0.368967 standard
0.368967 standard
0.052042 standard
0.154901 standard
0.177166 standard
0.177166 standard
0.1549 standard
0.052042 standard
1.00002 standard
1.00002 standard
0.371919 standard
0.37192 standard
0.0524405 standard
0.156413 standard
0.17958 standard
0.179677 standard
0.155714 standard
0.0526089 standard
1.00086 standard
1.00087 standard
0.379143 standard
0.379143 standard
0.0536971 standard
0.158805 standard
0.183295 standard
0.182853 standard
0.158919 standard
0.0534142 standard
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