Guided Ideographic Spin System Model Optimization

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Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-leucine

Simulation outputs:

InChI=1S/C6H13NO2/c1-4(2)3-5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t5-/m0/s1 Parameter Value
Field strength 899.75(MHz)
RMSD of the fit 0.03603
Temperature 298 K
pH 7.4
InChI InChI=1S/C6H13NO2/c1-4(2)3-5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t5-/m0/s1
pKa 2.33
pKa 9.74
Note 1 None

Sample description:

Compound Type Concentration
L- Leucine Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 0.1%
Show/Hide Spin System Matrix

Spin System Matrix

10 11 12 18 13 14 15 16 17 19
10 0.943 -12.5 -12.5 6.543 0 0 0 0 0 0
11 0 0.943 -12.5 6.543 0 0 0 0 0 0
12 0 0 0.943 6.543 0 0 0 0 0 0
18 0 0 0 1.692 6.543 6.543 6.543 8.305 7.304 0
13 0 0 0 0 0.954 -12.5 -12.5 0 0 0
14 0 0 0 0 0 0.954 -12.5 0 0 0
15 0 0 0 0 0 0 0.954 0 0 0
16 0 0 0 0 0 0 0 1.73 -15.87 5.262
17 0 0 0 0 0 0 0 0 1.676 10.086
19 0 0 0 0 0 0 0 0 0 3.722

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.922922 standard
0.99994 standard
1.00001 standard
0.922976 standard
0.000705125 standard
0.000961125 standard
0.001731 standard
0.0444542 standard
0.0640297 standard
0.0537801 standard
0.0849912 standard
0.0849983 standard
0.152424 standard
0.1748 standard
0.149087 standard
0.150226 standard
0.0688717 standard
0.132719 standard
0.0478968 standard
0.0636235 standard
0.162719 standard
0.1033 standard
0.106841 standard
0.0910879 standard
0.0793616 standard
0.0740736 standard
0.0453624 standard
0.0217005 standard
0.00128404 standard
0.000750125 standard
0.0229034 standard
0.097006 standard
0.111222 standard
0.206152 standard
0.103204 standard
0.183789 standard
1.0 standard
0.99908 standard
0.0342561 standard
0.033887 standard
0.0531461 standard
0.298256 standard
0.335467 standard
0.0541841 standard
0.0309351 standard
0.0240811 standard
0.00628412 standard
0.00206712 standard
0.00188012 standard
0.00148212 standard
0.0100871 standard
0.00719513 standard
0.0722154 standard
0.0680111 standard
0.120994 standard
0.0608971 standard
0.0599213 standard
0.0537203 standard
0.00538212 standard
1.0 standard
0.997878 standard
0.00980612 standard
0.027584 standard
0.0301481 standard
0.052301 standard
0.309141 standard
0.340077 standard
0.0568713 standard
0.0318751 standard
0.0242671 standard
0.00626613 standard
0.00185713 standard
0.00166212 standard
0.00127313 standard
0.00909312 standard
0.00674912 standard
0.0736471 standard
0.0698054 standard
0.131798 standard
0.0681452 standard
0.0682533 standard
0.0598451 standard
0.00603713 standard
1.0 standard
0.997242 standard
0.00442512 standard
0.00529812 standard
0.00758613 standard
0.0289691 standard
0.0313081 standard
0.053568 standard
0.317172 standard
0.358053 standard
0.0612562 standard
0.0337871 standard
0.0254 standard
0.00657512 standard
0.00190512 standard
0.00123712 standard
0.00961025 standard
0.077511 standard
0.0733851 standard
0.147912 standard
0.0782436 standard
0.078361 standard
0.0658513 standard
0.00670913 standard
1.0 standard
0.996992 standard
0.00502413 standard
0.00742912 standard
0.0303061 standard
0.0324483 standard
0.054406 standard
0.32062 standard
0.370863 standard
0.063802 standard
0.0355623 standard
0.026293 standard
0.00678313 standard
0.00196813 standard
0.00124513 standard
0.010046 standard
0.0800411 standard
0.0760831 standard
0.157941 standard
0.084734 standard
0.084945 standard
0.0691111 standard
0.00705325 standard
1.0 standard
0.996874 standard
0.00517 standard
0.00770113 standard
0.0316701 standard
0.033758 standard
0.0555914 standard
0.324221 standard
0.386068 standard
0.149183 standard
0.066647 standard
0.037562 standard
0.0274091 standard
0.007006 standard
0.00208013 standard
0.00126113 standard
0.0106131 standard
0.0824894 standard
0.0792471 standard
0.169469 standard
0.092467 standard
0.0926634 standard
0.0734036 standard
0.00745612 standard
0.97287 standard
1.0 standard
0.999038 standard
0.971998 standard
0.00112412 standard
0.00151212 standard
0.00756738 standard
0.00821213 standard
0.046165 standard
0.0483144 standard
0.0871842 standard
0.315844 standard
0.253237 standard
0.407596 standard
0.18584 standard
0.0782791 standard
0.0606693 standard
0.0611659 standard
0.007344 standard
0.00768204 standard
0.00574804 standard
0.00129712 standard
0.000949125 standard
0.0146484 standard
0.100019 standard
0.101222 standard
0.23851 standard
0.16157 standard
0.101337 standard
0.0101531 standard
0.938843 standard
1.0 standard
0.999603 standard
0.938592 standard
0.000899125 standard
0.00128412 standard
0.00829005 standard
0.0108334 standard
0.0532307 standard
0.0599141 standard
0.0556642 standard
0.0878389 standard
0.191914 standard
0.297286 standard
0.333711 standard
0.285923 standard
0.062247 standard
0.065205 standard
0.0863368 standard
0.0471083 standard
0.0344389 standard
0.00888035 standard
0.011367 standard
0.00128412 standard
0.000885125 standard
0.0173335 standard
0.102195 standard
0.108399 standard
0.235784 standard
0.117772 standard
0.123597 standard
0.114794 standard
0.0092338 standard
0.86817 standard
1.0 standard
0.999357 standard
0.868654 standard
0.00579938 standard
0.00326412 standard
0.00368504 standard
0.02833 standard
0.0504572 standard
0.0524316 standard
0.0778931 standard
0.153502 standard
0.275497 standard
0.253632 standard
0.180682 standard
0.240035 standard
0.0623129 standard
0.108075 standard
0.0532683 standard
0.0102232 standard
0.0157585 standard
0.00120913 standard
0.000798125 standard
0.0192241 standard
0.0952348 standard
0.109272 standard
0.224806 standard
0.0988232 standard
0.120058 standard
0.124331 standard
0.00645135 standard
0.678636 standard
1.0 standard
0.679153 standard
0.0030278 standard
0.00203612 standard
0.0237999 standard
0.0371557 standard
0.0398212 standard
0.0393697 standard
0.0753011 standard
0.120221 standard
0.202175 standard
0.152332 standard
0.1374 standard
0.0529246 standard
0.0929017 standard
0.0638423 standard
0.016424 standard
0.000972125 standard
0.000620125 standard
0.0172144 standard
0.0720065 standard
0.187104 standard
0.0758313 standard
0.116006 standard
0.00327133 standard
0.514808 standard
1.00074 standard
0.515042 standard
0.001449 standard
0.00158812 standard
0.0183857 standard
0.0276746 standard
0.0313434 standard
0.0324678 standard
0.0564875 standard
0.0568138 standard
0.0851108 standard
0.141348 standard
0.0749596 standard
0.123986 standard
0.126099 standard
0.0527115 standard
0.0709888 standard
0.0582442 standard
0.0156569 standard
0.000778125 standard
0.000474125 standard
0.0140634 standard
0.0527103 standard
0.1515 standard
0.0562251 standard
0.0963858 standard
0.643898 standard
1.00014 standard
0.643676 standard
0.00176117 standard
0.00120312 standard
0.0242716 standard
0.0361629 standard
0.0368631 standard
0.0464714 standard
0.0703067 standard
0.0783844 standard
0.105902 standard
0.11748 standard
0.122446 standard
0.139771 standard
0.0544675 standard
0.140544 standard
0.0661281 standard
0.0864723 standard
0.0721354 standard
0.0229556 standard
0.00105925 standard
0.000612125 standard
0.0177384 standard
0.0640203 standard
0.184737 standard
0.0685032 standard
0.123924 standard
0.773397 standard
1.00016 standard
0.999519 standard
0.772344 standard
0.00177767 standard
0.00146013 standard
0.0317804 standard
0.0473757 standard
0.0429294 standard
0.0607153 standard
0.0764096 standard
0.101882 standard
0.131496 standard
0.12772 standard
0.136878 standard
0.156149 standard
0.0588141 standard
0.160553 standard
0.0794631 standard
0.0558092 standard
0.0983408 standard
0.0770626 standard
0.0253021 standard
0.001223 standard
0.000704125 standard
0.0212276 standard
0.0780458 standard
0.21115 standard
0.0833106 standard
0.151302 standard
0.849123 standard
1.00009 standard
1.00025 standard
0.84927 standard
0.00162538 standard
0.00163625 standard
0.0377981 standard
0.0559598 standard
0.0473609 standard
0.0718398 standard
0.0779594 standard
0.122311 standard
0.148165 standard
0.135852 standard
0.1434 standard
0.0750023 standard
0.141303 standard
0.0628553 standard
0.175589 standard
0.0894758 standard
0.0624538 standard
0.10384 standard
0.0795255 standard
0.0247796 standard
0.00128538 standard
0.000741125 standard
0.0228399 standard
0.0864721 standard
0.21321 standard
0.0923719 standard
0.168029 standard
0.923246 standard
1.00007 standard
0.999123 standard
0.92218 standard
0.000707125 standard
0.000966125 standard
0.00175204 standard
0.044452 standard
0.0638227 standard
0.0537791 standard
0.0850475 standard
0.0849645 standard
0.15243 standard
0.174793 standard
0.149035 standard
0.150164 standard
0.0688158 standard
0.13265 standard
0.0478455 standard
0.0635971 standard
0.162629 standard
0.103262 standard
0.106803 standard
0.0910488 standard
0.079339 standard
0.0740533 standard
0.0453535 standard
0.0216865 standard
0.00128325 standard
0.000750125 standard
0.0228892 standard
0.0969779 standard
0.111179 standard
0.206094 standard
0.103171 standard
0.183739 standard
0.942201 standard
1.00016 standard
0.999148 standard
0.941093 standard
0.000709125 standard
0.000967 standard
0.00175625 standard
0.0461342 standard
0.0654972 standard
0.0554392 standard
0.0892505 standard
0.0880968 standard
0.164386 standard
0.197328 standard
0.155844 standard
0.152922 standard
0.130953 standard
0.0427688 standard
0.0649409 standard
0.0185905 standard
0.0335912 standard
0.151339 standard
0.118809 standard
0.108312 standard
0.0930096 standard
0.0789878 standard
0.0728652 standard
0.0454795 standard
0.0203701 standard
0.00128125 standard
0.000748125 standard
0.0219243 standard
0.100657 standard
0.108129 standard
0.203176 standard
0.10731 standard
0.18548 standard
0.954782 standard
0.999808 standard
1.00008 standard
0.955049 standard
0.000706125 standard
0.000963125 standard
0.00175804 standard
0.0476671 standard
0.0662553 standard
0.0565105 standard
0.0900242 standard
0.0906243 standard
0.164615 standard
0.212491 standard
0.15488 standard
0.130533 standard
0.0702247 standard
0.029512 standard
0.13973 standard
0.135462 standard
0.106789 standard
0.0908602 standard
0.0797797 standard
0.073169 standard
0.0463367 standard
0.0187429 standard
0.000736125 standard
0.0203694 standard
0.104589 standard
0.107853 standard
0.202004 standard
0.125283 standard
0.111016 standard
0.186844 standard
0.971033 standard
1.0 standard
0.999748 standard
0.970757 standard
0.000699125 standard
0.000956125 standard
0.00177 standard
0.050083 standard
0.0680596 standard
0.058769 standard
0.0853409 standard
0.096242 standard
0.140469 standard
0.229777 standard
0.150808 standard
0.12628 standard
0.0695894 standard
0.0255895 standard
0.118824 standard
0.156408 standard
0.10792 standard
0.093026 standard
0.0806919 standard
0.0728055 standard
0.0493471 standard
0.0150718 standard
0.000702125 standard
0.0166079 standard
0.111842 standard
0.112446 standard
0.199556 standard
0.121749 standard
0.119009 standard
0.185077 standard
0.987456 standard
1.00186 standard
1.00125 standard
0.986818 standard
0.000679125 standard
0.000932125 standard
0.00174623 standard
0.054141 standard
0.0731078 standard
0.061525 standard
0.088288 standard
0.0891968 standard
0.128264 standard
0.0772776 standard
0.154823 standard
0.184531 standard
0.143767 standard
0.121686 standard
0.0621022 standard
0.0240678 standard
0.00811157 standard
0.0102775 standard
0.0359589 standard
0.108465 standard
0.139098 standard
0.109376 standard
0.094275 standard
0.0827515 standard
0.0746866 standard
0.0569995 standard
0.00917807 standard
0.00317102 standard
0.00991279 standard
0.135345 standard
0.135555 standard
0.200051 standard
0.142393 standard
0.142274 standard
0.188047 standard
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