Guided Ideographic Spin System Model Optimization

Global links:

GISSMO Home

GISSMO Library

GISSMO Tutorial

GISSMO-GUI

Web Services:

Peak Search

Mixture Simulation

Mol to jpg conversion

Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-glutamic-acid

Simulation outputs:

InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/t3-/m0/s1 Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.00829
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/t3-/m0/s1
pKa 2.13
pKa 4.31
pKa 9.67
Note 1 None

Sample description:

Compound Type Concentration
L-glutamic acid Solute saturatedmM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 0.1%
Show/Hide Spin System Matrix

Spin System Matrix

13 14 11 12 15
13 2.329 -15.94 8.839 6.236 0
14 0 2.349 6.802 8.92 0
11 0 0 2.119 -14.868 4.733
12 0 0 0 2.05 7.229
15 0 0 0 0 3.748

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

Help

To zoom into a region, draw a box around it.
Hover over the x/y-axis and use mouse-wheel to zoom in/out.
Hover over the x/y-axis hold down left-button to move around the spectra.
(De)activate a spectrum by clicking on its legend.
PPM Amplitude Peak Type
0.100247 standard
0.220892 standard
0.161563 standard
0.412678 standard
0.551802 standard
0.349029 standard
0.53508 standard
0.333506 standard
0.291867 standard
0.261831 standard
0.430312 standard
0.44723 standard
0.37714 standard
0.364063 standard
0.234304 standard
0.206624 standard
0.147605 standard
0.130732 standard
0.0651765 standard
0.0969255 standard
0.818566 standard
0.830427 standard
0.91388 standard
0.976023 standard
1.00013 standard
0.942101 standard
0.638538 standard
0.654917 standard
0.0917153 standard
0.0515977 standard
0.706465 standard
0.769311 standard
0.768768 standard
0.706572 standard
0.0299031 standard
0.075283 standard
0.0376661 standard
0.187234 standard
0.474365 standard
0.516128 standard
1.0 standard
0.438562 standard
0.11905 standard
0.0419341 standard
0.00812112 standard
0.153725 standard
0.190192 standard
0.273186 standard
0.129279 standard
0.119365 standard
0.0148881 standard
0.0884943 standard
0.166308 standard
0.202215 standard
0.476229 standard
0.919173 standard
0.920288 standard
1.0 standard
0.984993 standard
0.708825 standard
0.652945 standard
0.193022 standard
0.276815 standard
0.125321 standard
0.00931125 standard
0.321841 standard
0.657721 standard
0.330293 standard
0.0112751 standard
0.00759225 standard
0.0167641 standard
0.105859 standard
0.156572 standard
0.239542 standard
0.520247 standard
0.235373 standard
0.83691 standard
0.271325 standard
0.682113 standard
0.36598 standard
1.0 standard
0.518093 standard
0.625428 standard
0.262479 standard
0.191781 standard
0.270208 standard
0.168736 standard
0.338398 standard
0.625129 standard
0.360398 standard
0.00810325 standard
0.0168143 standard
0.106714 standard
0.149358 standard
0.240656 standard
0.430278 standard
0.807266 standard
0.583991 standard
0.153392 standard
1.0 standard
0.454141 standard
0.607744 standard
0.260765 standard
0.179584 standard
0.332504 standard
0.609711 standard
0.347066 standard
0.010133 standard
0.0118202 standard
0.0239752 standard
0.124112 standard
0.167209 standard
0.27858 standard
0.43214 standard
0.371435 standard
0.816116 standard
0.690413 standard
0.0956793 standard
1.0 standard
0.727845 standard
0.295728 standard
0.220792 standard
0.371087 standard
0.643094 standard
0.392261 standard
0.0204519 standard
0.0436518 standard
0.0373796 standard
0.141616 standard
0.384688 standard
0.238281 standard
0.205238 standard
0.454324 standard
0.276795 standard
0.340119 standard
0.225844 standard
0.0385061 standard
0.0549444 standard
0.0461265 standard
0.0201103 standard
0.0129455 standard
0.0238347 standard
0.825863 standard
1.00001 standard
0.303737 standard
0.284537 standard
0.0147363 standard
0.344321 standard
0.395772 standard
0.385515 standard
0.34158 standard
0.040388 standard
0.091448 standard
0.0703392 standard
0.217091 standard
0.356427 standard
0.267047 standard
0.191723 standard
0.26311 standard
0.437454 standard
0.363521 standard
0.273394 standard
0.378768 standard
0.259891 standard
0.243081 standard
0.11119 standard
0.0843836 standard
0.0748618 standard
0.0637903 standard
0.0215532 standard
0.0342417 standard
0.942048 standard
1.00005 standard
0.391339 standard
0.385372 standard
0.0311026 standard
0.0143626 standard
0.422613 standard
0.46875 standard
0.466322 standard
0.42248 standard
0.0709114 standard
0.161356 standard
0.119024 standard
0.328104 standard
0.470128 standard
0.314583 standard
0.506047 standard
0.251409 standard
0.462455 standard
0.430236 standard
0.437412 standard
0.325199 standard
0.3113 standard
0.186001 standard
0.156122 standard
0.113336 standard
0.0990157 standard
0.0407356 standard
0.0660409 standard
0.821454 standard
0.829861 standard
1.00002 standard
0.979261 standard
0.531088 standard
0.536999 standard
0.0593476 standard
0.0303619 standard
0.580336 standard
0.635492 standard
0.634615 standard
0.580972 standard
0.100282 standard
0.220945 standard
0.161564 standard
0.414944 standard
0.551846 standard
0.349008 standard
0.5351 standard
0.333508 standard
0.291866 standard
0.261845 standard
0.430315 standard
0.447232 standard
0.377176 standard
0.364376 standard
0.238258 standard
0.206878 standard
0.148033 standard
0.130707 standard
0.0652118 standard
0.0969666 standard
0.818628 standard
0.830473 standard
0.913873 standard
0.976024 standard
1.00013 standard
0.94208 standard
0.638624 standard
0.655057 standard
0.0913221 standard
0.0516975 standard
0.706605 standard
0.769449 standard
0.768957 standard
0.707014 standard
0.122979 standard
0.255979 standard
0.189976 standard
0.474661 standard
0.581828 standard
0.365307 standard
0.538225 standard
0.294258 standard
0.246749 standard
0.277956 standard
0.40441 standard
0.403066 standard
0.424434 standard
0.398153 standard
0.393724 standard
0.253964 standard
0.228521 standard
0.17253 standard
0.153303 standard
0.0905548 standard
0.125566 standard
0.091165 standard
0.833896 standard
0.859285 standard
0.922433 standard
0.950982 standard
1.0002 standard
0.970374 standard
0.718872 standard
0.729524 standard
0.121385 standard
0.0745074 standard
0.783613 standard
0.849767 standard
0.848863 standard
0.784997 standard
0.139116 standard
0.280461 standard
0.209009 standard
0.505304 standard
0.600031 standard
0.365605 standard
0.527593 standard
0.292855 standard
0.251394 standard
0.285436 standard
0.388077 standard
0.385831 standard
0.399593 standard
0.4105 standard
0.407074 standard
0.407126 standard
0.262378 standard
0.229286 standard
0.189152 standard
0.168131 standard
0.114347 standard
0.154595 standard
0.111107 standard
0.838109 standard
0.919341 standard
0.951652 standard
0.929128 standard
0.978983 standard
1.00033 standard
0.832939 standard
0.771867 standard
0.122568 standard
0.148406 standard
0.0966094 standard
0.826757 standard
0.891403 standard
0.891028 standard
0.826066 standard
0.131568 standard
0.266642 standard
0.192584 standard
0.454091 standard
0.537345 standard
0.33443 standard
0.470688 standard
0.263489 standard
0.228663 standard
0.258594 standard
0.341001 standard
0.340507 standard
0.353305 standard
0.365537 standard
0.374636 standard
0.368023 standard
0.240692 standard
0.206593 standard
0.210477 standard
0.176052 standard
0.157131 standard
0.11358 standard
0.14968 standard
0.109932 standard
0.756583 standard
0.921297 standard
0.931819 standard
0.834229 standard
0.897345 standard
1.00054 standard
0.71151 standard
0.118736 standard
0.142192 standard
0.0969712 standard
0.759525 standard
0.817941 standard
0.819999 standard
0.759868 standard
0.104176 standard
0.203041 standard
0.153117 standard
0.361058 standard
0.402018 standard
0.288547 standard
0.25339 standard
0.351614 standard
0.199863 standard
0.174886 standard
0.198725 standard
0.255247 standard
0.254666 standard
0.262247 standard
0.274844 standard
0.291618 standard
0.286112 standard
0.186496 standard
0.176652 standard
0.1588 standard
0.162242 standard
0.137602 standard
0.123111 standard
0.0940902 standard
0.121713 standard
0.0909547 standard
0.575508 standard
0.923358 standard
0.642854 standard
0.719346 standard
1.00096 standard
0.550953 standard
0.0966593 standard
0.11389 standard
0.0808776 standard
0.587082 standard
0.63208 standard
0.632056 standard
0.587086 standard
0.108487 standard
0.203042 standard
0.154453 standard
0.351066 standard
0.40206 standard
0.280339 standard
0.246117 standard
0.330329 standard
0.193704 standard
0.172365 standard
0.194574 standard
0.240526 standard
0.24074 standard
0.247714 standard
0.264307 standard
0.282697 standard
0.27931 standard
0.188939 standard
0.174456 standard
0.153873 standard
0.158607 standard
0.1413 standard
0.125969 standard
0.10616 standard
0.132495 standard
0.100717 standard
0.561953 standard
0.9109 standard
1.00185 standard
0.553174 standard
0.111206 standard
0.127646 standard
0.0929699 standard
0.587207 standard
0.633835 standard
0.633508 standard
0.586581 standard
0.105857 standard
0.194853 standard
0.150423 standard
0.334357 standard
0.379884 standard
0.229675 standard
0.318985 standard
0.183241 standard
0.163973 standard
0.185967 standard
0.229867 standard
0.229722 standard
0.231027 standard
0.247744 standard
0.265889 standard
0.270707 standard
0.177943 standard
0.161734 standard
0.150964 standard
0.155547 standard
0.137265 standard
0.121819 standard
0.107216 standard
0.132414 standard
0.102692 standard
0.530059 standard
0.600735 standard
1.00075 standard
0.91188 standard
0.605216 standard
0.527569 standard
0.111277 standard
0.126996 standard
0.0945419 standard
0.562192 standard
0.606594 standard
0.605152 standard
0.562678 standard
0.116633 standard
0.209787 standard
0.162308 standard
0.364384 standard
0.414256 standard
0.246561 standard
0.322878 standard
0.196609 standard
0.177145 standard
0.201376 standard
0.240132 standard
0.239816 standard
0.245637 standard
0.265501 standard
0.294021 standard
0.290449 standard
0.196066 standard
0.178938 standard
0.163313 standard
0.168282 standard
0.149908 standard
0.133505 standard
0.12217 standard
0.148539 standard
0.116893 standard
0.571874 standard
0.597098 standard
1.00011 standard
0.680082 standard
0.736341 standard
0.608495 standard
0.577656 standard
0.125955 standard
0.142819 standard
0.108347 standard
0.610709 standard
0.656796 standard
0.656801 standard
0.610714 standard
0.186455 standard
0.333253 standard
0.25167 standard
0.55642 standard
0.609838 standard
0.425583 standard
0.365871 standard
0.481669 standard
0.293214 standard
0.267552 standard
0.303714 standard
0.365362 standard
0.36513 standard
0.366687 standard
0.399589 standard
0.435445 standard
0.447365 standard
0.301313 standard
0.270044 standard
0.248151 standard
0.256623 standard
0.233283 standard
0.206538 standard
0.19965 standard
0.241256 standard
0.19559 standard
0.857489 standard
0.837896 standard
0.925265 standard
0.906745 standard
0.80163 standard
0.927443 standard
0.870246 standard
0.877885 standard
0.210241 standard
0.2343 standard
0.180585 standard
0.931667 standard
1.00033 standard
1.00034 standard
0.931717 standard
0.192981 standard
0.324995 standard
0.257033 standard
0.567318 standard
0.598405 standard
0.407208 standard
0.352521 standard
0.440202 standard
0.279285 standard
0.262431 standard
0.296556 standard
0.348064 standard
0.349328 standard
0.350339 standard
0.386153 standard
0.450437 standard
0.429187 standard
0.307121 standard
0.270734 standard
0.251139 standard
0.258572 standard
0.23715 standard
0.211559 standard
0.225382 standard
0.269421 standard
0.229898 standard
0.825818 standard
0.787896 standard
0.795578 standard
0.924739 standard
0.88569 standard
0.839392 standard
0.814398 standard
0.866082 standard
0.239069 standard
0.258245 standard
0.208575 standard
0.928604 standard
1.0004 standard
1.0004 standard
0.928644 standard
View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks View GSD Peaks