Guided Ideographic Spin System Model Optimization

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Mixture Simulation

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Simulation: simulation_1

BMRB entry

ALATIS cross link

Gateway cross link

Download simulation data

View entry XML

Download entry NMR-STAR

Download entry NMReDATA

External links:

NMRFAM Servers

pKa (R. Williams)

1H NMR (Hans J. Reich)

L-citrulline

Simulation outputs:

InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)/t4-/m0/s1 Parameter Value
Field strength 499.84(MHz)
RMSD of the fit 0.02702
Temperature 298 K
pH 7.4
InChI InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)/t4-/m0/s1
pKa 2.43
pKa 9.69
Note 1 higher field

Sample description:

Compound Type Concentration
L-Citrulline Solute 100mM
D2O Solvent 100%
sodium phosphate Buffer 50mM
sodium azide Cytocide 500uM
DSS Reference 500uM
Show/Hide Spin System Matrix

Spin System Matrix

13 14 15 16 19 17 18
13 1.883 -12.318 2.216 12.121 0 4.649 9.113
14 0 1.852 9.1 2.221 0 8.83 4.579
15 0 0 1.524 -13.117 5.621 0 0
16 0 0 0 1.588 6.77 0 0
19 0 0 0 0 3.743 0 0
17 0 0 0 0 0 3.126 -13.208
18 0 0 0 0 0 0 3.14

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.0755161 standard
0.0934628 standard
0.0980629 standard
0.152526 standard
0.231581 standard
0.247379 standard
0.271385 standard
0.240913 standard
0.223907 standard
0.270552 standard
0.209535 standard
0.194446 standard
0.166115 standard
0.197547 standard
0.276416 standard
0.250337 standard
0.194868 standard
0.22632 standard
0.143575 standard
0.102939 standard
0.0954982 standard
0.0908945 standard
0.0295781 standard
0.0454858 standard
0.049562 standard
0.0726158 standard
0.162475 standard
0.348104 standard
0.356184 standard
0.377109 standard
0.394783 standard
0.454675 standard
0.357692 standard
0.306122 standard
0.305482 standard
0.14545 standard
0.125841 standard
0.0625288 standard
0.0432649 standard
0.039641 standard
0.0294883 standard
0.0354986 standard
0.0687966 standard
0.574979 standard
0.581331 standard
1.00015 standard
0.561781 standard
0.54744 standard
0.0677648 standard
0.0361961 standard
0.44889 standard
0.691019 standard
0.448876 standard
0.162269 standard
0.157302 standard
0.319215 standard
0.84059 standard
1.0 standard
0.990761 standard
0.415921 standard
0.398544 standard
0.242039 standard
0.15176 standard
0.143087 standard
0.0175021 standard
0.0150801 standard
0.0268931 standard
0.590166 standard
0.636201 standard
0.322305 standard
0.261327 standard
0.487503 standard
0.243348 standard
0.213303 standard
0.242543 standard
0.422644 standard
0.695965 standard
1.0 standard
0.543163 standard
0.56663 standard
0.490137 standard
0.485595 standard
0.313426 standard
0.314189 standard
0.235476 standard
0.164585 standard
0.809847 standard
0.90773 standard
0.493224 standard
0.0178711 standard
0.339358 standard
0.632426 standard
0.353121 standard
0.24308 standard
0.358506 standard
0.475138 standard
0.434183 standard
0.677147 standard
0.591979 standard
0.423805 standard
0.472715 standard
0.570647 standard
0.483482 standard
0.544902 standard
0.36053 standard
0.297153 standard
0.170266 standard
0.0100941 standard
0.916584 standard
1.0 standard
0.56816 standard
0.363683 standard
0.715465 standard
0.405903 standard
0.249066 standard
0.389173 standard
0.464446 standard
0.482205 standard
0.510898 standard
0.643631 standard
0.521393 standard
0.362376 standard
0.349809 standard
0.527402 standard
0.481364 standard
0.448679 standard
0.596752 standard
0.366891 standard
0.316641 standard
0.173133 standard
0.0100791 standard
0.922842 standard
1.0 standard
0.578717 standard
0.360076 standard
0.722837 standard
0.412102 standard
0.0122521 standard
0.22755 standard
0.253658 standard
0.411734 standard
0.469815 standard
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0.518327 standard
0.63778 standard
0.387643 standard
0.480328 standard
0.390393 standard
0.489581 standard
0.482651 standard
0.45782 standard
0.636707 standard
0.378926 standard
0.333399 standard
0.176942 standard
0.0236911 standard
0.0102701 standard
0.928363 standard
1.00001 standard
0.601516 standard
0.364054 standard
0.738169 standard
0.423896 standard
0.0249025 standard
0.0514981 standard
0.195249 standard
0.398121 standard
0.529707 standard
0.507364 standard
0.237759 standard
0.0686543 standard
0.0577761 standard
0.0538476 standard
0.0199651 standard
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0.215066 standard
0.49036 standard
0.59151 standard
0.352945 standard
0.128205 standard
0.120479 standard
0.0226292 standard
0.022545 standard
0.0118926 standard
0.033858 standard
0.759195 standard
1.00002 standard
0.663021 standard
0.372022 standard
0.665285 standard
0.373193 standard
0.0399613 standard
0.0587431 standard
0.0662396 standard
0.19622 standard
0.32087 standard
0.255859 standard
0.380506 standard
0.273692 standard
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0.21565 standard
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0.367134 standard
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0.28925 standard
0.213332 standard
0.102953 standard
0.0285135 standard
0.0256987 standard
0.015906 standard
0.0168645 standard
0.040142 standard
0.689546 standard
1.00006 standard
0.604193 standard
0.039055 standard
0.0166492 standard
0.363068 standard
0.602914 standard
0.363096 standard
0.056774 standard
0.0746586 standard
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0.100734 standard
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0.220383 standard
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0.178532 standard
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0.121735 standard
0.0856222 standard
0.0763687 standard
0.0743977 standard
0.004743 standard
0.0214271 standard
0.0379752 standard
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0.147015 standard
0.256871 standard
0.315264 standard
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0.347893 standard
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0.454386 standard
0.357471 standard
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0.0626313 standard
0.0431131 standard
0.0396098 standard
0.0294753 standard
0.0354934 standard
0.0687747 standard
0.574695 standard
0.581015 standard
1.00018 standard
0.562083 standard
0.547561 standard
0.0677155 standard
0.0361894 standard
0.448729 standard
0.690684 standard
0.448715 standard
0.0998298 standard
0.118513 standard
0.125457 standard
0.209392 standard
0.272825 standard
0.287028 standard
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0.272183 standard
0.227505 standard
0.213054 standard
0.194754 standard
0.189225 standard
0.216362 standard
0.308718 standard
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0.211767 standard
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0.15872 standard
0.129554 standard
0.120054 standard
0.115608 standard
0.0406021 standard
0.0570357 standard
0.0625503 standard
0.10103 standard
0.190499 standard
0.193684 standard
0.410947 standard
0.403116 standard
0.441865 standard
0.457291 standard
0.416777 standard
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0.342321 standard
0.249136 standard
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0.165158 standard
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0.154192 standard
0.085468 standard
0.055632 standard
0.051152 standard
0.0400426 standard
0.0526033 standard
0.093609 standard
0.0650069 standard
0.617543 standard
0.627837 standard
1.00004 standard
0.623599 standard
0.601858 standard
0.0921932 standard
0.0535224 standard
0.535426 standard
0.816474 standard
0.535261 standard
0.133646 standard
0.154101 standard
0.164455 standard
0.273808 standard
0.334386 standard
0.355963 standard
0.329479 standard
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0.308848 standard
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0.347103 standard
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0.16484 standard
0.155285 standard
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0.081021 standard
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0.232896 standard
0.24771 standard
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0.439321 standard
0.445455 standard
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0.441445 standard
0.349059 standard
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0.198292 standard
0.117649 standard
0.0731041 standard
0.0675859 standard
0.0546633 standard
0.0782315 standard
0.128757 standard
0.0899809 standard
0.720095 standard
0.780205 standard
0.780027 standard
1.00015 standard
0.987096 standard
0.763747 standard
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0.704603 standard
0.0892711 standard
0.127276 standard
0.0793908 standard
0.662641 standard
0.995343 standard
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0.139533 standard
0.15917 standard
0.170261 standard
0.281339 standard
0.335323 standard
0.356174 standard
0.328473 standard
0.452971 standard
0.303402 standard
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0.249884 standard
0.017261 standard
0.230554 standard
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0.333002 standard
0.350686 standard
0.28785 standard
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0.198293 standard
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0.54356 standard
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0.460536 standard
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0.0764139 standard
0.0704806 standard
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0.135274 standard
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1.00006 standard
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0.280728 standard
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0.458473 standard
0.295113 standard
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0.335752 standard
0.19792 standard
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0.670318 standard
1.0 standard
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0.0899767 standard
0.131757 standard
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0.996108 standard
0.710218 standard
0.695666 standard
1.00061 standard
0.586373 standard
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0.137081 standard
0.0585235 standard
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0.142116 standard
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0.360652 standard
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0.136998 standard
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1.00004 standard
0.708703 standard
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1.00003 standard
0.800031 standard
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0.15592 standard
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0.701678 standard
1.00011 standard
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0.595504 standard
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0.191956 standard
0.1527 standard
0.685045 standard
1.00004 standard
0.683608 standard
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