Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

1H NMR (Hans J. Reich)

(1-Methyl-1H-indol-5-yl)methylamine

Simulation outputs:

InChI=1S/C10H12N2/c1-12-5-4-9-6-8(7-11)2-3-10(9)12/h2-6H,7,11H2,1H3 Parameter Value
Field strength 600.01(MHz)
RMSD of the fit 0.01461
Temperature 298 K
pH 7.4
InChI InChI=1S/C10H12N2/c1-12-5-4-9-6-8(7-11)2-3-10(9)12/h2-6H,7,11H2,1H3
Note 1 18?19
Note 2 16?17
Note 3 COSY would be good
Note 4 ~10% contaminant

Sample description:

Compound Type Concentration
(1-Methyl-1H-indol-5-yl)methylamine Solute 75uM
DSS Reference 15uM
bis-Tris-d19 Buffer 11mM
NaCl . 150mM
NaN3 . 0.04%.
Na Formate . 200uM
Show/Hide Spin System Matrix

Spin System Matrix

13 14 15 16 17 18 19 20 21 22
13 3.825 -14.0 -14.0 0 0 0 0 0 0 0
14 0 3.825 -14.0 0 0 0 0 0 0 0
15 0 0 3.825 0 0 0 0 0 0 0
16 0 0 0 6.581 3.304 0 0 0 0 0
17 0 0 0 0 7.339 0 0 0 0 0
18 0 0 0 0 0 7.541 9.831 0 0 0
19 0 0 0 0 0 0 7.304 0 0 0
20 0 0 0 0 0 0 0 7.729 0 0
21 0 0 0 0 0 0 0 0 4.268 -14.0
22 0 0 0 0 0 0 0 0 0 4.268

Spectra

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PPM Amplitude Peak Type
1.0 standard
0.667553 standard
0.181092 standard
0.181092 standard
0.15759 standard
0.181158 standard
0.181721 standard
0.181395 standard
0.179921 standard
0.157143 standard
0.333545 standard
1.0 standard
0.66746 standard
0.164958 standard
0.198092 standard
0.057686 standard
0.23523 standard
0.463864 standard
0.323543 standard
0.375837 standard
1.0 standard
0.667467 standard
0.170077 standard
0.192196 standard
0.0810912 standard
0.225558 standard
0.422725 standard
0.273237 standard
0.0903165 standard
0.33849 standard
1.0 standard
0.666897 standard
0.172897 standard
0.189023 standard
0.0979472 standard
0.226609 standard
0.374912 standard
0.249423 standard
0.0978723 standard
0.335637 standard
1.0 standard
0.666641 standard
0.173677 standard
0.188087 standard
0.104395 standard
0.230791 standard
0.34961 standard
0.241213 standard
0.103155 standard
0.335032 standard
1.0 standard
0.666952 standard
0.174297 standard
0.187328 standard
0.109872 standard
0.237492 standard
0.329669 standard
0.234568 standard
0.108073 standard
0.334731 standard
1.0 standard
0.666148 standard
0.177344 standard
0.18395 standard
0.137238 standard
0.31274 standard
0.188774 standard
0.202453 standard
0.13542 standard
0.33354 standard
1.0 standard
0.666658 standard
0.180765 standard
0.180766 standard
0.147222 standard
0.202288 standard
0.191038 standard
0.184553 standard
0.19124 standard
0.14602 standard
0.333468 standard
1.0 standard
0.664761 standard
0.180632 standard
0.180633 standard
0.152135 standard
0.18932 standard
0.183858 standard
0.182216 standard
0.185344 standard
0.151333 standard
0.333029 standard
1.0 standard
0.666413 standard
0.180576 standard
0.180576 standard
0.155375 standard
0.184119 standard
0.182766 standard
0.182123 standard
0.182089 standard
0.154802 standard
0.333332 standard
1.0 standard
0.666242 standard
0.18095 standard
0.18095 standard
0.157467 standard
0.181016 standard
0.181579 standard
0.181253 standard
0.17978 standard
0.157019 standard
0.333283 standard
1.0 standard
0.665843 standard
0.180987 standard
0.180987 standard
0.158945 standard
0.178939 standard
0.181183 standard
0.180995 standard
0.178087 standard
0.158569 standard
0.333194 standard
1.0 standard
0.666418 standard
0.180383 standard
0.180383 standard
0.159594 standard
0.178206 standard
0.181601 standard
0.181455 standard
0.177507 standard
0.159281 standard
0.333306 standard
1.0 standard
0.666581 standard
0.181148 standard
0.181148 standard
0.160133 standard
0.177541 standard
0.181059 standard
0.18094 standard
0.176945 standard
0.159852 standard
0.333336 standard
1.0 standard
0.665887 standard
0.180672 standard
0.180672 standard
0.160963 standard
0.176371 standard
0.181086 standard
0.181006 standard
0.175923 standard
0.160732 standard
0.333193 standard
1.0 standard
0.666914 standard
0.180823 standard
0.180823 standard
0.161411 standard
0.176002 standard
0.181191 standard
0.181123 standard
0.175636 standard
0.161235 standard
0.333397 standard
1.0 standard
0.665915 standard
0.180913 standard
0.180913 standard
0.16168 standard
0.175512 standard
0.18124 standard
0.181184 standard
0.17513 standard
0.161453 standard
0.333195 standard
1.0 standard
0.666598 standard
0.181398 standard
0.181398 standard
0.163249 standard
0.173846 standard
0.180549 standard
0.180524 standard
0.173612 standard
0.163083 standard
0.333327 standard
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