Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

1H NMR (Hans J. Reich)

2-[(2-Chlorobenzyl)thio]-4,5-dihydro-1H-imidazol-3-ium hydrochloride

Simulation outputs:

InChI=1S/C10H11ClN2S.ClH/c11-9-4-2-1-3-8(9)7-14-10-12-5-6-13-10;/h1-4H,5-7H2,(H,12,13);1H Parameter Value
Field strength 600.01(MHz)
RMSD of the fit 0.03211
Temperature 298 K
pH 7.4
InChI InChI=1S/C10H11ClN2S.ClH/c11-9-4-2-1-3-8(9)7-14-10-12-5-6-13-10;/h1-4H,5-7H2,(H,12,13);1H
Note 1 23,24 very weak (saturated)
Note 2 figure

Sample description:

Compound Type Concentration
2-[(2-Chlorobenzyl)thio]-4,5-dihydro-1H-imidazol-3-ium hydrochloride Solute 75uM
DSS Reference 15uM
bis-Tris-d19 Buffer 11mM
NaCl . 150mM
NaN3 . 0.04%.
Na Formate . 200uM
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Spin System Matrix

15 16 17 18 19 20 21 22 23 24
15 5.333 6.81 6.55 1.5 0 0 0 0 0 0
16 0 5.794 1.5 6.55 0 0 0 0 0 0
17 0 0 5.326 0.5 0 0 0 0 0 0
18 0 0 0 6.192 0 0 0 0 0 0
19 0 0 0 0 3.522 13.16 5.6 5.6 0 0
20 0 0 0 0 0 3.542 5.6 5.6 0 0
21 0 0 0 0 0 0 3.327 12.85 0 0
22 0 0 0 0 0 0 0 3.353 0 0
23 0 0 0 0 0 0 0 0 4.049 13.48
24 0 0 0 0 0 0 0 0 0 4.049

Spectra

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PPM Amplitude Peak Type
1.0 standard
0.499577 standard
0.0220609 standard
0.0253226 standard
0.0683941 standard
0.0739271 standard
0.080734 standard
0.112985 standard
0.0775786 standard
0.0765831 standard
0.0757237 standard
0.0305172 standard
0.0265176 standard
0.168109 standard
0.162691 standard
0.142568 standard
0.139588 standard
1.0 standard
0.501229 standard
0.0283961 standard
0.507682 standard
0.0282661 standard
1.0 standard
0.500461 standard
0.04327 standard
0.0783921 standard
0.346342 standard
0.353806 standard
0.0783351 standard
0.04203 standard
1.0 standard
0.500554 standard
0.0568922 standard
0.09745 standard
0.260287 standard
0.274573 standard
0.114724 standard
0.0961102 standard
0.054685 standard
1.0 standard
0.500243 standard
0.0630602 standard
0.10376 standard
0.221074 standard
0.120205 standard
0.238311 standard
0.109863 standard
0.103205 standard
0.0603763 standard
1.0 standard
0.5002 standard
0.0686622 standard
0.108791 standard
0.198282 standard
0.103165 standard
0.22135 standard
0.107302 standard
0.108084 standard
0.0656511 standard
1.0 standard
0.500049 standard
0.00869512 standard
0.014635 standard
0.0872944 standard
0.133248 standard
0.138613 standard
0.11435 standard
0.030601 standard
0.0153531 standard
0.0153161 standard
0.0322601 standard
0.178288 standard
0.113032 standard
0.107899 standard
0.0888373 standard
0.0987933 standard
1.0 standard
0.500057 standard
0.0126221 standard
0.0179249 standard
0.0651281 standard
0.096726 standard
0.136665 standard
0.119356 standard
0.088516 standard
0.0278536 standard
0.0175536 standard
0.00729112 standard
0.0201483 standard
0.169557 standard
0.127485 standard
0.104499 standard
0.115718 standard
1.0 standard
0.500012 standard
0.0160569 standard
0.0208372 standard
0.0641439 standard
0.0726609 standard
0.0732419 standard
0.121844 standard
0.0913885 standard
0.079278 standard
0.07858 standard
0.0282711 standard
0.0210336 standard
0.0120764 standard
0.167069 standard
0.145242 standard
0.122043 standard
0.126387 standard
1.0 standard
0.500134 standard
0.019398 standard
0.0232914 standard
0.0655599 standard
0.0722921 standard
0.118152 standard
0.127207 standard
0.0763685 standard
0.0756917 standard
0.0294633 standard
0.0242911 standard
0.00728112 standard
0.166899 standard
0.156136 standard
0.135276 standard
0.134039 standard
1.0 standard
0.499856 standard
0.0220649 standard
0.0253275 standard
0.0684071 standard
0.0739411 standard
0.08075 standard
0.113008 standard
0.0775946 standard
0.0765979 standard
0.0757387 standard
0.0305232 standard
0.0265226 standard
0.168142 standard
0.162722 standard
0.142595 standard
0.139614 standard
1.0 standard
0.500004 standard
0.0243771 standard
0.0271546 standard
0.0712615 standard
0.0755081 standard
0.0680829 standard
0.0724756 standard
0.0650084 standard
0.0632519 standard
0.0776374 standard
0.0766143 standard
0.0316279 standard
0.0283352 standard
0.168295 standard
0.166372 standard
0.148356 standard
0.144876 standard
1.0 standard
0.500004 standard
0.0255466 standard
0.028154 standard
0.0723945 standard
0.075591 standard
0.0658192 standard
0.0661476 standard
0.0574786 standard
0.0602531 standard
0.0777616 standard
0.0764851 standard
0.0322856 standard
0.0292513 standard
0.167691 standard
0.167178 standard
0.149842 standard
0.146447 standard
1.0 standard
0.500003 standard
0.0261061 standard
0.0286045 standard
0.0733536 standard
0.0762621 standard
0.0637965 standard
0.0629348 standard
0.0550251 standard
0.0588131 standard
0.0782443 standard
0.0771417 standard
0.0325433 standard
0.0298786 standard
0.167913 standard
0.167753 standard
0.151058 standard
0.146952 standard
1.0 standard
0.500002 standard
0.0277507 standard
0.0299132 standard
0.0750168 standard
0.0767896 standard
0.0608486 standard
0.0594601 standard
0.0527147 standard
0.0567037 standard
0.0788159 standard
0.0780012 standard
0.0337655 standard
0.0314466 standard
0.168534 standard
0.168803 standard
0.154126 standard
0.151471 standard
1.0 standard
0.500002 standard
0.0283744 standard
0.0304316 standard
0.0757268 standard
0.077354 standard
0.059397 standard
0.057439 standard
0.0517566 standard
0.055574 standard
0.0791724 standard
0.078728 standard
0.034044 standard
0.0318923 standard
0.168018 standard
0.168457 standard
0.153848 standard
0.151834 standard
1.0 standard
0.500002 standard
0.0291887 standard
0.0311446 standard
0.0769073 standard
0.0778887 standard
0.0591032 standard
0.0573466 standard
0.0519477 standard
0.0554111 standard
0.0798868 standard
0.0789809 standard
0.0343826 standard
0.032352 standard
0.169168 standard
0.170596 standard
0.153037 standard
0.150761 standard
1.0 standard
0.500001 standard
0.0314358 standard
0.0329363 standard
0.0793046 standard
0.079886 standard
0.0552654 standard
0.0538567 standard
0.0494287 standard
0.051525 standard
0.0811221 standard
0.0805742 standard
0.0356277 standard
0.0341742 standard
0.16983 standard
0.171133 standard
0.156707 standard
0.154579 standard
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