Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

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Cis-1,2,3,6-Tetrahydrophthalimide

Simulation outputs:

InChI=1S/C8H9NO2/c10-7-5-3-1-2-4-6(5)8(11)9-7/h1-2,5-6H,3-4H2,(H,9,10,11)/t5-,6+ Parameter Value
Field strength 600.01(MHz)
RMSD of the fit 0.03566
Temperature 298 K
pH 7.4
InChI InChI=1S/C8H9NO2/c10-7-5-3-1-2-4-6(5)8(11)9-7/h1-2,5-6H,3-4H2,(H,9,10,11)/t5-,6+
Note 1 symmetric
Note 2 coupling not correct

Sample description:

Compound Type Concentration
Cis-1,2,3,6-Tetrahydrophthalimide Solute 75uM
DSS Reference 15uM
bis-Tris-d19 Buffer 11mM
NaCl . 150mM
NaN3 . 0.04%.
Na Formate . 200uM
Show/Hide Spin System Matrix

Spin System Matrix

12 13 14 15 16 17 18 19
12 5.958 7.63 6.189 6.189 0 0 0 0
13 0 5.959 0 0 6.189 6.189 0 0
14 0 0 2.264 -18.771 0 0 7.204 0
15 0 0 0 2.458 0 0 3.325 0
16 0 0 0 0 2.264 -18.771 0 7.204
17 0 0 0 0 0 2.458 0 3.325
18 0 0 0 0 0 0 3.265 7.0
19 0 0 0 0 0 0 0 3.265

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.215444 standard
0.366857 standard
0.231434 standard
0.211931 standard
0.30603 standard
0.499357 standard
0.294116 standard
0.527364 standard
0.525327 standard
0.0840959 standard
0.383318 standard
0.381966 standard
0.1215 standard
0.821785 standard
0.838081 standard
0.824475 standard
0.120927 standard
0.108188 standard
0.621863 standard
0.655539 standard
1.0005 standard
0.662019 standard
0.625998 standard
0.108852 standard
0.0312751 standard
0.0260781 standard
1.0 standard
0.0527171 standard
0.0393101 standard
0.0435961 standard
0.111047 standard
0.519331 standard
0.526787 standard
0.396382 standard
0.0512501 standard
0.0749982 standard
0.398266 standard
0.408463 standard
0.597589 standard
0.400266 standard
0.370107 standard
0.0595131 standard
0.03457 standard
0.0610921 standard
0.374769 standard
1.0 standard
0.988507 standard
0.965905 standard
0.0592951 standard
0.0615881 standard
0.0620221 standard
0.109454 standard
0.596433 standard
0.615392 standard
0.498251 standard
0.0657743 standard
0.0833871 standard
0.452097 standard
0.473091 standard
0.703395 standard
0.471247 standard
0.444042 standard
0.074355 standard
0.0522113 standard
0.0933802 standard
0.0659213 standard
0.0756884 standard
0.374461 standard
0.867021 standard
0.826457 standard
1.0 standard
0.927901 standard
0.091376 standard
0.0924192 standard
0.110809 standard
0.648228 standard
0.671665 standard
0.566843 standard
0.0757011 standard
0.088145 standard
0.490441 standard
0.517525 standard
0.768285 standard
0.512279 standard
0.486164 standard
0.0852704 standard
0.063582 standard
0.113862 standard
0.078049 standard
0.0864005 standard
0.379667 standard
0.780318 standard
0.79758 standard
1.0 standard
0.11266 standard
0.11367 standard
0.116609 standard
0.697605 standard
0.721432 standard
0.620689 standard
0.0840581 standard
0.092252 standard
0.526338 standard
0.556759 standard
0.827074 standard
0.552506 standard
0.525013 standard
0.0924892 standard
0.0812346 standard
0.147019 standard
0.098885 standard
0.105845 standard
0.413785 standard
0.829937 standard
0.916507 standard
1.0 standard
0.843179 standard
0.14502 standard
0.145647 standard
0.13242 standard
0.799617 standard
0.827169 standard
0.720494 standard
0.09825 standard
0.105698 standard
0.604287 standard
0.63779 standard
0.950333 standard
0.635714 standard
0.603781 standard
0.105332 standard
0.148793 standard
0.258356 standard
0.168968 standard
0.1643 standard
0.365946 standard
0.638461 standard
0.382893 standard
0.0782222 standard
0.661531 standard
0.656594 standard
0.263946 standard
0.264312 standard
0.128407 standard
0.832184 standard
0.855898 standard
0.800458 standard
0.115397 standard
0.111874 standard
0.635886 standard
0.669701 standard
1.00006 standard
0.66988 standard
0.635765 standard
0.111873 standard
0.180114 standard
0.307614 standard
0.196825 standard
0.185091 standard
0.339523 standard
0.568385 standard
0.338242 standard
0.595127 standard
0.591819 standard
0.0833164 standard
0.319645 standard
0.318763 standard
0.124408 standard
0.82487 standard
0.848732 standard
0.812463 standard
0.118613 standard
0.111037 standard
0.632467 standard
0.665453 standard
1.00001 standard
0.668404 standard
0.632087 standard
0.111201 standard
0.198721 standard
0.336645 standard
0.214169 standard
0.199747 standard
0.323808 standard
0.535835 standard
0.315387 standard
0.55767 standard
0.557889 standard
0.0836101 standard
0.350721 standard
0.34988 standard
0.121927 standard
0.817801 standard
0.845616 standard
0.819979 standard
0.120664 standard
0.11024 standard
0.627204 standard
0.664473 standard
1.00028 standard
0.664473 standard
0.627207 standard
0.110239 standard
0.208724 standard
0.352485 standard
0.224228 standard
0.207496 standard
0.313715 standard
0.512732 standard
0.30294 standard
0.537307 standard
0.537197 standard
0.083981 standard
0.368896 standard
0.367594 standard
0.121102 standard
0.819979 standard
0.846594 standard
0.815222 standard
0.121467 standard
0.110105 standard
0.624553 standard
0.660637 standard
1.00042 standard
0.662648 standard
0.628112 standard
0.109688 standard
0.215461 standard
0.367646 standard
0.231408 standard
0.211921 standard
0.306031 standard
0.49936 standard
0.294118 standard
0.527218 standard
0.525292 standard
0.0840949 standard
0.383319 standard
0.381967 standard
0.121501 standard
0.821787 standard
0.838085 standard
0.824477 standard
0.120928 standard
0.108189 standard
0.621867 standard
0.655544 standard
1.0005 standard
0.662025 standard
0.626001 standard
0.108853 standard
0.220516 standard
0.375468 standard
0.236955 standard
0.21932 standard
0.300591 standard
0.488385 standard
0.289342 standard
0.513394 standard
0.516254 standard
0.0842312 standard
0.394664 standard
0.391759 standard
0.121328 standard
0.815127 standard
0.846364 standard
0.823523 standard
0.121795 standard
0.107175 standard
0.617817 standard
0.651792 standard
1.00076 standard
0.663254 standard
0.621442 standard
0.107434 standard
0.222351 standard
0.380015 standard
0.237912 standard
0.220143 standard
0.296829 standard
0.489413 standard
0.285223 standard
0.512977 standard
0.510563 standard
0.0845093 standard
0.397453 standard
0.396052 standard
0.121716 standard
0.823193 standard
0.843631 standard
0.817528 standard
0.121598 standard
0.107216 standard
0.616451 standard
0.649039 standard
1.00086 standard
0.662269 standard
0.618457 standard
0.106876 standard
0.223452 standard
0.379855 standard
0.238224 standard
0.218597 standard
0.294444 standard
0.485298 standard
0.281892 standard
0.505813 standard
0.505564 standard
0.0844013 standard
0.400739 standard
0.400929 standard
0.121818 standard
0.817855 standard
0.846244 standard
0.820246 standard
0.120904 standard
0.106742 standard
0.616227 standard
1.00106 standard
0.653234 standard
0.611695 standard
0.105604 standard
0.226666 standard
0.384139 standard
0.241867 standard
0.222523 standard
0.288479 standard
0.476297 standard
0.27899 standard
0.500313 standard
0.50271 standard
0.0840374 standard
0.407586 standard
0.403011 standard
0.121704 standard
0.829164 standard
0.835228 standard
0.820934 standard
0.121917 standard
0.103982 standard
0.612609 standard
0.651453 standard
1.00116 standard
0.608035 standard
0.105618 standard
0.226148 standard
0.392668 standard
0.241504 standard
0.223555 standard
0.287165 standard
0.470909 standard
0.277204 standard
0.496533 standard
0.499081 standard
0.0841149 standard
0.408587 standard
0.407808 standard
0.121698 standard
0.816898 standard
0.842434 standard
0.824566 standard
0.121416 standard
0.103967 standard
0.603544 standard
1.00145 standard
0.610153 standard
0.104089 standard
0.227314 standard
0.387719 standard
0.24317 standard
0.223807 standard
0.286531 standard
0.471528 standard
0.275629 standard
0.496282 standard
0.493954 standard
0.0841257 standard
0.41445 standard
0.41312 standard
0.120744 standard
0.815022 standard
0.841045 standard
0.819864 standard
0.12102 standard
0.102875 standard
0.598203 standard
1.00161 standard
0.610666 standard
0.102937 standard
0.227391 standard
0.397012 standard
0.24488 standard
0.228529 standard
0.27747 standard
0.458956 standard
0.26635 standard
0.486448 standard
0.483665 standard
0.42137 standard
0.422379 standard
0.121332 standard
0.81544 standard
0.833491 standard
0.81469 standard
0.121313 standard
0.0986068 standard
0.58319 standard
1.00219 standard
0.588865 standard
0.100671 standard
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