Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

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N-methyl-(5-pyrid-4-ylthien-2-yl)methylamine

Simulation outputs:

InChI=1S/C11H12N2S/c1-12-8-10-2-3-11(14-10)9-4-6-13-7-5-9/h2-7,12H,8H2,1H3 Parameter Value
Field strength 600.01(MHz)
RMSD of the fit 0.02880
Temperature 298 K
pH 7.4
InChI InChI=1S/C11H12N2S/c1-12-8-10-2-3-11(14-10)9-4-6-13-7-5-9/h2-7,12H,8H2,1H3
Note 1 24,25 very low intensity (saturation?)

Sample description:

Compound Type Concentration
N-methyl-(5-pyrid-4-ylthien-2-yl)methylamine Solute 75uM
DSS Reference 15uM
bis-Tris-d19 Buffer 11mM
NaCl . 150mM
NaN3 . 0.04%.
Na Formate . 200uM
Show/Hide Spin System Matrix

Spin System Matrix

15 16 17 18 19 20 21 22 23 24 25
15 2.76 -14.0 -14.0 0 0 0 0 0 0 0 0
16 0 2.76 -14.0 0 0 0 0 0 0 0 0
17 0 0 2.76 0 0 0 0 0 0 0 0
18 0 0 0 7.337 3.817 0 0 0 0 0 0
19 0 0 0 0 7.676 0 0 0 0 0 0
20 0 0 0 0 0 7.707 1.5 5.893 0 0 0
21 0 0 0 0 0 0 7.707 0 5.893 0 0
22 0 0 0 0 0 0 0 8.531 1.5 0 0
23 0 0 0 0 0 0 0 0 8.531 0 0
24 0 0 0 0 0 0 0 0 0 4.481 -14.0
25 0 0 0 0 0 0 0 0 0 0 4.481

Spectra

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PPM Amplitude Peak Type
1.0 standard
0.665114 standard
0.177311 standard
0.177312 standard
0.178935 standard
0.179813 standard
0.293473 standard
0.292838 standard
0.292117 standard
0.292117 standard
1.0 standard
0.666019 standard
0.139552 standard
0.226912 standard
0.461279 standard
0.376992 standard
0.338584 standard
0.24557 standard
1.0 standard
0.666029 standard
0.150675 standard
0.208905 standard
0.439893 standard
0.238353 standard
0.346948 standard
0.323269 standard
0.260776 standard
1.0 standard
0.6673 standard
0.15694 standard
0.200739 standard
0.365515 standard
0.241203 standard
0.332423 standard
0.315817 standard
0.268592 standard
1.0 standard
0.666694 standard
0.159039 standard
0.197979 standard
0.302869 standard
0.349184 standard
0.256155 standard
0.327119 standard
0.313061 standard
0.271279 standard
1.0 standard
0.666267 standard
0.160805 standard
0.195635 standard
0.281159 standard
0.344903 standard
0.323044 standard
0.310832 standard
0.273169 standard
1.0 standard
0.666673 standard
0.168936 standard
0.18638 standard
0.201106 standard
0.346041 standard
0.306071 standard
0.301633 standard
0.282315 standard
1.0 standard
0.663933 standard
0.171287 standard
0.182915 standard
0.189387 standard
0.190466 standard
0.298558 standard
0.295559 standard
0.29322 standard
0.288804 standard
1.0 standard
0.666441 standard
0.176385 standard
0.178584 standard
0.181935 standard
0.183503 standard
0.29662 standard
0.294551 standard
0.293127 standard
0.291551 standard
1.0 standard
0.666776 standard
0.176571 standard
0.17833 standard
0.180645 standard
0.180541 standard
0.294108 standard
0.293142 standard
0.292146 standard
0.291952 standard
1.0 standard
0.665664 standard
0.177371 standard
0.177371 standard
0.178994 standard
0.179873 standard
0.293571 standard
0.292936 standard
0.292215 standard
0.292214 standard
1.0 standard
0.666578 standard
0.17741 standard
0.17741 standard
0.178999 standard
0.17952 standard
0.293766 standard
0.291389 standard
0.292755 standard
0.292755 standard
1.0 standard
0.664741 standard
0.177345 standard
0.177345 standard
0.178007 standard
0.178438 standard
0.293237 standard
0.292926 standard
0.292441 standard
0.292441 standard
1.0 standard
0.665419 standard
0.176924 standard
0.176924 standard
0.17827 standard
0.178615 standard
0.291177 standard
0.290918 standard
0.290489 standard
0.290489 standard
1.0 standard
0.663458 standard
0.176968 standard
0.176968 standard
0.178191 standard
0.178424 standard
0.293972 standard
0.291521 standard
0.291175 standard
0.29345 standard
1.0 standard
0.66405 standard
0.176902 standard
0.176901 standard
0.178072 standard
0.17827 standard
0.292441 standard
0.291912 standard
0.291599 standard
0.291976 standard
1.0 standard
0.666246 standard
0.177109 standard
0.177109 standard
0.178243 standard
0.178411 standard
0.293775 standard
0.293648 standard
0.293362 standard
0.293362 standard
1.0 standard
0.667598 standard
0.177942 standard
0.177942 standard
0.177615 standard
0.177692 standard
0.291835 standard
0.295684 standard
0.295508 standard
0.291603 standard
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