Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

1H NMR (Hans J. Reich)

(2-Thien-2-ylpyrimidin-5-yl)methanol

Simulation outputs:

InChI=1S/C9H8N2OS/c12-6-7-4-10-9(11-5-7)8-2-1-3-13-8/h1-5,12H,6H2 Parameter Value
Field strength 600.01(MHz)
RMSD of the fit 0.12088
Temperature 298 K
pH 7.4
InChI InChI=1S/C9H8N2OS/c12-6-7-4-10-9(11-5-7)8-2-1-3-13-8/h1-5,12H,6H2
Note 1 19,20 missing (saturated?)
Note 2 15?16

Sample description:

Compound Type Concentration
(2-Thien-2-ylpyrimidin-5-yl)methanol Solute 75uM
DSS Reference 15uM
bis-Tris-d19 Buffer 11mM
NaCl . 150mM
NaN3 . 0.04%.
Na Formate . 200uM
Show/Hide Spin System Matrix

Spin System Matrix

14 15 16 17 18 19 20
14 7.266 5.264 4.272 0 0 0 0
15 0 7.708 0 0 0 0 0
16 0 0 7.98 0 0 0 0
17 0 0 0 8.749 1.5 0 0
18 0 0 0 0 8.749 0 0
19 0 0 0 0 0 4.089 11.11
20 0 0 0 0 0 0 4.081

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
0.0268532 standard
0.783535 standard
0.0267798 standard
0.137281 standard
0.214404 standard
0.137902 standard
0.25946 standard
0.258855 standard
0.262972 standard
0.262971 standard
1.0 standard
0.998918 standard
0.0926892 standard
0.201477 standard
0.202851 standard
0.332047 standard
0.201212 standard
0.304378 standard
0.232216 standard
1.0 standard
0.999144 standard
0.105152 standard
0.205981 standard
0.178918 standard
0.308474 standard
0.214684 standard
0.290062 standard
0.24088 standard
1.0 standard
0.99893 standard
0.112271 standard
0.20838 standard
0.167672 standard
0.296342 standard
0.225819 standard
0.283176 standard
0.247351 standard
1.0 standard
0.998652 standard
0.114741 standard
0.209298 standard
0.164046 standard
0.292035 standard
0.229081 standard
0.280635 standard
0.248881 standard
1.0 standard
0.998411 standard
0.116814 standard
0.209415 standard
0.161209 standard
0.288592 standard
0.23177 standard
0.278736 standard
0.250204 standard
1.0 standard
0.992628 standard
0.127826 standard
0.210837 standard
0.147451 standard
0.273395 standard
0.24476 standard
0.267912 standard
0.258394 standard
1.0 standard
0.0132783 standard
0.975507 standard
0.0132356 standard
0.1329 standard
0.209337 standard
0.142522 standard
0.267438 standard
0.25022 standard
0.263761 standard
0.262489 standard
1.0 standard
0.0169792 standard
0.936865 standard
0.0169792 standard
0.134788 standard
0.21128 standard
0.139901 standard
0.263474 standard
0.254017 standard
0.263245 standard
0.263242 standard
1.0 standard
0.0215661 standard
0.880513 standard
0.0215661 standard
0.136331 standard
0.211131 standard
0.13805 standard
0.260225 standard
0.257355 standard
0.263108 standard
0.263106 standard
1.0 standard
0.0268533 standard
0.783541 standard
0.0267795 standard
0.137249 standard
0.2139 standard
0.137881 standard
0.259439 standard
0.258234 standard
0.262972 standard
0.262971 standard
1.0 standard
0.0325556 standard
0.668333 standard
0.668333 standard
0.0325556 standard
0.137134 standard
0.212678 standard
0.137134 standard
0.258697 standard
0.258698 standard
0.262852 standard
0.262851 standard
1.0 standard
0.0355715 standard
0.644259 standard
0.64426 standard
0.0356577 standard
0.137329 standard
0.207242 standard
0.13733 standard
0.25892 standard
0.258921 standard
0.262793 standard
0.262793 standard
1.0 standard
0.038705 standard
0.599956 standard
0.599956 standard
0.038705 standard
0.13727 standard
0.214375 standard
0.13727 standard
0.258821 standard
0.258821 standard
0.262961 standard
0.26296 standard
1.0 standard
0.0451266 standard
0.553226 standard
0.553226 standard
0.0451266 standard
0.137212 standard
0.211951 standard
0.137212 standard
0.258721 standard
0.258721 standard
0.262958 standard
0.262957 standard
1.0 standard
0.0484109 standard
0.535226 standard
0.535224 standard
0.0483115 standard
0.137492 standard
0.21517 standard
0.137064 standard
0.258688 standard
0.258689 standard
0.262676 standard
0.262675 standard
1.0 standard
0.0515747 standard
0.519881 standard
0.519881 standard
0.0515747 standard
0.137294 standard
0.211219 standard
0.137294 standard
0.258751 standard
0.258751 standard
0.263071 standard
0.263071 standard
1.0 standard
0.0708521 standard
0.461153 standard
0.461153 standard
0.0708521 standard
0.137268 standard
0.207994 standard
0.137268 standard
0.258652 standard
0.258652 standard
0.263126 standard
0.263126 standard
1.0 standard
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