Guided Ideographic Spin System Model Optimization

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Simulation: simulation_1

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pKa (R. Williams)

1H NMR (Hans J. Reich)

4-(Aminomethyl)pyrimidine hydrochloride

Simulation outputs:

InChI=1S/C5H7N3.ClH/c6-3-5-1-2-7-4-8-5;/h1-2,4H,3,6H2;1H Parameter Value
Field strength 600.01(MHz)
RMSD of the fit 0.01530
Temperature 298 K
pH 7.4
InChI InChI=1S/C5H7N3.ClH/c6-3-5-1-2-7-4-8-5;/h1-2,4H,3,6H2;1H
Note 1 None

Sample description:

Compound Type Concentration
4-(Aminomethyl)pyrimidine hydrochloride Solute 75uM
DSS Reference 15uM
bis-Tris-d19 Buffer 11mM
NaCl . 150mM
NaN3 . 0.04%.
Na Formate . 200uM
Show/Hide Spin System Matrix

Spin System Matrix

9 10 11 12 13
9 8.781 5.652 0 0 0
10 0 7.6 0 0 0.549
11 0 0 4.352 -14.0 0
12 0 0 0 4.352 0
13 0 0 0 0 9.147

Spectra

Select field strength to view simulated spectra and peak lists (standard and GSD): Autoscale

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PPM Amplitude Peak Type
1.0 standard
0.256592 standard
0.256592 standard
0.26533 standard
0.265331 standard
0.482988 standard
1.0 standard
0.230027 standard
0.283838 standard
0.296729 standard
0.24478 standard
0.487663 standard
1.0 standard
0.238546 standard
0.274509 standard
0.285527 standard
0.249259 standard
0.484488 standard
1.0 standard
0.242662 standard
0.269895 standard
0.280101 standard
0.252494 standard
0.48323 standard
1.0 standard
0.244199 standard
0.268179 standard
0.278366 standard
0.253735 standard
0.482839 standard
1.0 standard
0.245296 standard
0.266876 standard
0.276951 standard
0.254722 standard
0.482524 standard
1.0 standard
0.253368 standard
0.259398 standard
0.268024 standard
0.262432 standard
0.48196 standard
1.0 standard
0.256601 standard
0.256602 standard
0.265091 standard
0.2651 standard
0.483054 standard
1.0 standard
0.255884 standard
0.255884 standard
0.265154 standard
0.265157 standard
0.481778 standard
1.0 standard
0.25629 standard
0.25629 standard
0.265036 standard
0.265038 standard
0.482384 standard
1.0 standard
0.256592 standard
0.256592 standard
0.26533 standard
0.265331 standard
0.482988 standard
1.0 standard
0.256133 standard
0.256133 standard
0.264824 standard
0.264824 standard
0.481745 standard
1.0 standard
0.257036 standard
0.257036 standard
0.265019 standard
0.265019 standard
0.479152 standard
1.0 standard
0.25608 standard
0.25608 standard
0.264723 standard
0.264723 standard
0.481739 standard
1.0 standard
0.256547 standard
0.253585 standard
0.26472 standard
0.26472 standard
0.482976 standard
1.0 standard
0.255667 standard
0.255667 standard
0.265014 standard
0.265014 standard
0.481104 standard
1.0 standard
0.257753 standard
0.257753 standard
0.265013 standard
0.265013 standard
0.479146 standard
1.0 standard
0.257082 standard
0.257082 standard
0.26491 standard
0.26491 standard
0.48417 standard
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